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Laboratory of Mathematic methods and models in bioinformatics,
Institute for Information Transmission Problems,
Russian Academy of Sciences

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Publications of laboratory staff

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    2019

    Articles

  1. [Q1 1.5 WoS] V.G. Kanovei, V.A. Lyubetsky. The full basis theorem does not imply analytic wellordering. Transactions of the American mathematical society, 2019, submitted
  2. [Q1 .8 WoS] V.G. Kanovei, V.A. Lyubetsky. Definable minimal collapse functions at arbitrary projective levels. Journal of Symbolic Logic, 2019, accepted.
    $ RFBR 03-01-00757, RSF 14-50-00150.
  3. [Q2 .7 WoS] V.G. Kanovei, V.A. Lyubetsky. Borel OD sets of reals are OD-Borel in some simple models. Proceedings of the American Mathematical Society, 2019, in print.
    DOI: 10.1090/proc/14286. $ RFBR 17-01-00705, RSF 14-50-00150.
  4. [Q3 .6 WoS] V.G. Kanovei, V.A. Lyubetsky. Non-uniformizable sets with countable cross-sections on a given level of the projective hierarchy. Fundamenta mathematicae, 2019, accepted.
    $ RFBR 17-01-00757, RSF 14-50-00150.
  5. [Q3 .6 WoS] No English citation is currently avaliable for this publication.
    В.Г. Кановей, В.А. Любецкий. Определимые элементы определимых борелевских множеств. Математические заметки, июнь 2021, том 110, вып. 6, принята.
    $ РФФИ 17-01-00705, РНФ 14-50-00150.
  6. [Q4 .4 WoS] V.G. Kanovei, V.A. Lyubetsky. Canonization of smooth equivalence relations on infinite-dimensional E0-large products. Notre Dame Journal of Formal Logic, 2019, accepted
  7. 2018

    Books

  8. A. Troitsky, L. Rusin, (Eds.). Molecular Phylogenetics. Contributions to the 5th Moscow International Conference “Molecular Phylogenetics and Biodiversity Biobanking” (Moscow, Russia, August 25–28, 2018), Moscow: Torus Press, 2018, 138 p.: ill., ISBN 978-5-94588-234-8
  9. Articles

  10. [Q4 1.8 WoS] A.V. Seliverstov, L.I. Rubanov, G.A. Shilovsky, O.A. Zverkov, V.A. Lyubetsky. Longevity in euarchontoglires: lost genes as a determinant. FEBS Open Bio, Jul 5 2018, Vol. 8, Suppl. 1, P. 456–457.
    DOI: 10.1002/2211-5463.12453, WOS000437674105151, ISTINA: 129706313. $ RSF 14-50-00150.
  11. [Scopus] K.Yu. Gorbunov, V.A. Lyubetsky. Transformation of large chromosome structures: an algorithm of equalization of gene contents. CEUR Workshop Proceedings, Feb 23 2018, Vol. 2064, Convergent Cognitive Information Technologies 2017, P. 395–401, in Russian.
    Scopus: 2-s2.0-85044532023, ISTINA: 110758795. $ РНФ 14-50-00150. i,
  12. [Scopus] O.A. Zverkov, L.I. Rubanov, L.Yu. Rusin, A.V. Seliverstov, V.A. Lyubetsky. Finding long highly conserved elements in complete animal genomes. CEUR Workshop Proceedings, Feb 23 2018, Vol. 2064, Convergent Cognitive Information Technologies 2017, P. 402–408, in Russian.
    Scopus: 2-s2.0-85044513196, ISTINA: 110759752. $ РНФ 14-50-00150. i,
  13. [Q2 2.7 WoS] T.G. Simdyanov, G.G. Paskerova, A. Valigurova, A. Diakin, M. Kovacikova, J. Schrevel, L. Guillou, A.A. Dobrovolskij, V.V. Aleoshin. First ultrastructural and molecular phylogenetic evidence from the blastogregarines, an early branching lineage of plesiomorphic Apicomplexa. Protist, Nov 2018, Vol. 169, Iss. 5, P. 697–726.
    DOI: 10.1016/j.protis.2018.04.006, WOS000444618900007, Scopus: 2-s2.0-85051705369, PMID30125804,
  14. [Q4 1.7 WoS] G.A. Shilovsky, T.S. Putyatina, V.V. Ashapkin, A.A. Rozina, V.A. Lyubetsky, E.P. Minina, I.B. Bychkovskaia, A.V. Markov, V.P. Skulachev. Ants as Object of Gerontological Research. Biochemistry (Moscow), Dec 2018, Vol. 83, Iss. 12–13, P. 1489–1503.
    DOI: 10.1134/S0006297918120076, ISTINA: 160476991. $ RSF 14-50-00029.
  15. [РИНЦ+ВАК] G.A. Shilovsky, V.V. Ashapkin, N.S. Linkova, V.Kh. Khavinson, B.F. Vanyushin. Expression of KLF, PTEN, SUMO1, APOE, SOD2, and SHC1 genes in differently «aged» quiescent cells: a model for testing of some geroprotectors. Clinical Gerontology, 2018, Vol. 24, No. 9–10, P. 80–82, in Russian
  16. [РИНЦ+ВАК] G.A. Shilovsky, T.S. Putyatina, V.V. Ashapkin, E.P. Minina, V.A. Lyubetsky, B.F. Vanyushin. Anti-aging medicine: requirements for geroprotectors for aged persons. Clinical Gerontology, 2018, Vol. 24, No. 9–10, P. 82–84, in Russian
  17. V.V. Aleoshin, G.S. Slyusarev, K.V. Mikhailov, L.Yu. Rusin, O.V. Popova, O.A. Zverkov, V.A. Lyubetsky. Orthonectida and Dicyemida: two stories of body plan simplification. In: Molecular Phylogenetics, (Eds.: A. Troitsky, L. Rusin), Moscow: Torus Press, 2018, P. 3–4.
    DOI: 10.30826/MolPhy2018-01,
  18. [Q1 1.0 WoS] V.G. Kanovei, V.A. Lyubetsky. Definable E0 classes at arbitrary projective levels. Annals of Pure and Applied Logic, Sep 2018, Vol. 169, Iss. 9, P. 851–871.
    DOI: 10.1016/j.apal.2018.04.006, WOS000439538800001, Scopus: 2-s2.0-85046128737, ISTINA: 123276915. $ RFBR 17-01-00705, RSF 14-50-00150.
  19. [Q1 .8 WoS] F.S. Herzberg, V.G. Kanovei, M.G. Katz, V.A. Lyubetsky. Minimal axiomatic frameworks for definable hyperreals with transfer. Journal of Symbolic Logic, Mar 2018, Vol. 83, Iss. 1, P. 385–391.
    DOI: 10.1017/jsl.2017.48, WOS000431290300022, Scopus: 2-s2.0-85043588162, ISTINA: 88755476. $ RFBR 17-01-00705, RSF 14-50-00150.
  20. [Q1 1.2 WoS] Sy-D. Friedman, V. Gitman, V.G. Kanovei. A model of second-order arithmetic satisfying AC but not DC. Journal of Mathematical Logic, 21 Sep 2018, Vol. 18, No. 2, ID 1850013, 39 pp.
    DOI: 10.1142/S0219061318500137, Scopus: 2-s2.0-85053776193. $ RFBR 17-01-00705.
  21. [Q2 .9 WoS] V.G. Kanovei, V.A. Lyubetsky. Non-uniformizable sets of second projective level with countable cross-sections in the form of Vitali classes. Izvestiya: Mathematics, 2018, Vol. 82, No. 1, P. 61–90.
    DOI: 10.1070/IM8521, WOS000427245900004, Scopus: 2-s2.0-85043703476, ISTINA: 88755057. $ RFBR 17-01-00705, RSF 14-50-00150. i,
  22. [Q2 .8 WoS] P. Blaszczyk, V.G. Kanovei, M.G. Katz, T. Nowik. Monotone subsequence via ultrapower. Open Mathematics, Mar 2 2018, Vol. 16, Iss. 1, P. 149–153.
    DOI: 10.1515/math-2018-0015, WOS000428396700002, Scopus: 2-s2.0-85043581249,
  23. [Q2 .7 WoS] T. Bascelli, P. Blaszczyk, V.G. Kanovei, K.U. Katz, M.G. Katz, S.S. Kutateladze, T. Nowik, D.M. Schaps, D. Sherry. Gregory’s sixth operation. Foundations of Science, Mar 2018, Vol. 23, Iss. 1, P. 133–144.
    DOI: 10.1007/s10699-016-9512-9, WOS000426932100009, Scopus: 2-s2.0-85006833539, eLIBRARY: 29470196,
  24. [Q2 .7 WoS] T. Bascelli, P. Blaszczyk, A. Borovik, V.G. Kanovei, K.U. Katz, M.G. Katz, S.S. Kutateladze, T. McGaffey, D.M. Schaps, D. Sherry. Cauchy’s infinitesimals, his sum theorem, and foundational paradigms. Foundations of Science, Jun 2018, Vol. 23, Iss. 2, P. 267–296.
    DOI: 10.1007/s10699-017-9534-y, WOS000432736600008, Scopus: 2-s2.0-85021226787, eLIBRARY: 31031064. $ RFBR 17-01-00705.
  25. [Q3 .5 WoS] V.G. Kanovei, V.A. Lyubetsky. Countable OD sets of reals belong to the ground model. Archive for Mathematical Logic, May 2018, Vol. 57, Iss. 3–4, P. 285–298.
    DOI: 10.1007/s00153-017-0569-0, WOS000428317500005, Scopus: 2-s2.0-85021254314, eLIBRARY: 31038998, ISTINA: 87048552. $ RSF 14-50-00150, RFBR 17-01-00705.
  26. [WoS] V.G. Kanovei, K.U. Katz, M.G. Katz, T. Mormann. What makes a theory of infinitesimals useful? A view by Klein and Fraenkel. Journal of Humanistic Mathematics, Jan 2018, Vol. 8, Iss. 1, P. 108–119.
    DOI: 10.5642/jhummath.201801.07, WOS000429301200006, i. $ RFBR 17-01-00705.
  27. [Scopus] A.V. Seliverstov. Binary solutions to some systems of linear equations. In: Optimization Problems and Their Applications, Eremeev A., Khachay M., Kochetov Y., Pardalos P. (eds), Springer, Cham, 2018, Communications in Computer and Information Science, Vol. 871, P. 183–192.
    DOI: 10.1007/978-3-319-93800-4_15. $ RSF 14-50-00150.
  28. [Q4 .6 WoS] K.Yu. Gorbunov, V.A. Lyubetsky. A linear algorithm for restructuring a graph. Automation and Remote Control, 2018, Vol. 79, No. 12, P. 2202–2215, in press.
    DOI: 10.1134/S0005117918120093, ISTINA: 160477443. $ RSF 14-50-00150.
  29. [WoS] V.A. Lyubetsky, E.V. Lyubetskaya, K.Yu. Gorbunov. Linear algorithm for a cyclic graph transformation. Lobachevskii Journal of Mathematics, 2018, Vol. 39, No. 9, P. 1217–1227, in press.
    DOI: 10.1134/S1995080218090147, ISTINA: 160477593. $ RSF 14-50-00150.
  30. Abstracts

  31. A.V. Seliverstov, G.A. Shilovsky, L.I. Rubanov, O.A. Zverkov, V.A. Lyubetsky. Longevity in mammals: lost genes as a determinant. Bioinformatics of Genome Regulation and Structure\Systems Biology (BGRS\SB-2018): The Eleventh International Conference Abstracts, 20–25 August 2018, Novosibirsk, Russia, Novosibirsk: ICG SB RAS, 2018, P. 249.
    DOI: 10.18699/BGRSSB-2018-221,
  32. No English citation is currently avaliable for this publication.
    С.В. Исаев, О.А. Зверков, К.В. Михайлов, В.В. Алёшин, Ю.В. Панчин. Кольцевые последовательности ДНК в геноме Dicyema sp.. Труды 42-й конференции «Информационные технологии и системы» (ИТиС’18), Казань, Россия, 25–30 сентября 2018, стр. 584–587, i,
  33. No English citation is currently avaliable for this publication.
    Д.Д. Короткова, А.С. Иванова, Н.Ю. Мартынова, В.А. Любецкий, А.В. Селиверстов, А.М. Нестеренко, М.Б. Терёшина, А.Г. Зарайский. Роль нового трансмембранного регулятора регенерации и развития мозга - c-Answer - в функционировании пуринэргического рецептора P2Y1 и рецептора факторов роста фибробластов FGFR4. Перспективные направления физико-химической биологии и биотехнологии: Сборник тезисов XXX зимней молодежной научной школы, (Сост.: Стукачева Е.А., Шереметьева Э.В.), 12–15 февраля 2018, Москва, Россия, М.: ИБХ РАН, 2018, стр. 72–73.
    eLIBRARY32869223,
  34. E.V. Romanova, Yu.S. Bukin, V.V. Aleoshin, D.Yu. Sherbakov. Transport RNA genes remolding in mitochondrial genomes. The Second All-Russian Scientific Conference with international participation “Regulation Mechanisms of Eukariotic Cell Organelle Functions”, 2018, P. 109–110, in Russian.
    DOI: 10.31255/978-5-94797-318-1-109-110
  35. No English citation is currently avaliable for this publication.
    А.В. Селиверстов. О некоторых вещественных кубических гиперповерхностях. Алгебра и теория алгоритмов : Всероссийская конференция, посвященная 100-летию факультета математики и компьютерных наук Ивановского государственного университета : сборник материалов, г. Иваново, 21–24 марта 2018, Иваново: Ивановский государственный университет, 2018, стр. 179–181.
    eLIBRARY35219130,
  36. A.V. Seliverstov. Real cubic hypersurfaces containing no line of singular points. International Conference Polynomial Computer Algebra '2018, Russian Academy of Sciences, St. Petersburg Department of Steklov Mathematical Institute, Euler International Mathematical Institute, April 19–21 2018, St. Petersburg, Russia, Ed. by N. N. Vassiliev, VVM Publishing, 2018, P. 109–110, i,
  37. A.V. Seliverstov. Recognizing real cubic hypersurfaces without a straight line of singular points. International Algebraic Conference dedicated to the 110th anniversary of Professor A.G.Kurosh. Proceedings, Moscow, MSU, 2018, P. 177–179, in Russian
  38. A.V. Seliverstov. Note on binary solutions to some systems of algebraic equations. Algebra, Number Theory and Discrete Geometry: modern problems and applications: Proceedings of the XV International Conference dedicated to the centenary of the birth of Professor Nikolai Mikhailovich Korobov, Tula: Tula State Pedagogical University of Leo Tolstoy, 2018, P. 197–199, in Russian
  39. No English citation is currently avaliable for this publication.
    А.В. Селиверстов. Двоичные решения некоторых систем линейных уравнений. Проблемы оптимизации и их приложения = Optimization Problems and Their Applications (OPTA-2018) : тезисы докладов VII Международной конференции : памяти проф. А.А. Колоколова, Омск, Россия, 8–14 июля 2018 г., ред.: С.В. Белим и др., Омск: Изд-во Ом. гос. ун-та, 2018, стр. 105,
  40. No English citation is currently avaliable for this publication.
    А.В. Селиверстов. Эллиптические точки на графиках многочленов третьей степени. Труды 61-й Всероссийской научной конференции МФТИ, 19–25 ноября 2018, i
  41. Preprints

  42. V.G. Kanovei, V.A. Lyubetsky. Non-uniformizable sets with countable cross-sections on a given level of the projective hierarchy. Eprint, arXiv:1712.00769v3 [math.LO], 31 Jan 2018, i,
  43. V.G. Kanovei, K.U. Katz, M.G. Katz, T. Mormann. What makes a theory of infinitesimals useful? A view by Klein and Fraenkel. Eprint, arXiv:1802.01972 [math.HO], 1 Feb 2018, 10 pp., i,
  44. P. Blaszczyk, V.G. Kanovei, M.G. Katz, T. Nowik. Monotone subsequence via ultrapower. Eprint, arXiv:1803.00312 [math.CA], 1 Mar 2018, i,
  45. V.G. Kanovei, V.A. Lyubetsky. Canonization of smooth equivalence relations on infinite-dimensional perfect cubes. Eprint, arXiv:1804.05174 [math.LO], 14/23 Apr 2018, i,
  46. Sy-D. Friedman, V. Gitman, V.G. Kanovei. A model of second-order arithmetic satisfying AC but not DC. Eprint, arXiv:1808.04732 [math.LO], 14/15 Aug 2018, i,
  47. V.G. Kanovei, V.A. Lyubetsky. A countable definable set of reals containing no definable elements. Eprint, arXiv:1408.3901v2 [math.LO], 3 Sep 2018, i,
  48. V.G. Kanovei, V.A. Lyubetsky. On Harrington's model in which Separation holds but Reduction fails at the 3rd projective level. Eprint, arXiv:1810.12542 [math.LO], 30 Oct 2018, i,
  49. V.G. Kanovei, V.A. Lyubetsky. On intermediate extensions of generic extensions by a random real. Eprint, arXiv:1811.10568 [math.LO], 26 Nov 2018, i,
  50. Other

  51. V.A. Lyubetsky, K.Yu. Gorbunov. A linear algorithms of cyclic graph reconfiguration. GraphHPC: Сonference on Parallel LargeSscale Graph Processing, Moscow, Russia, March 1 2018, oral presentation
  52. V.G. Kanovei. What can hold exactly on N-th projective level. Descriptive set theory conference, Lausanne, Switzerland, June 18–22 2018, plenary report, i
  53. V.G. Kanovei. Canonization on product and iterated perfect and large perfect sets. Ramsey Theory in Logic, Combinatorics and Complexity, Bertinoro (Forli-Cesena), Italy, July 15–20 2018, plenary report, i
  54. 2017

    Articles

  55. [Q1 2.2 WoS] V.A. Lyubetsky, R.A. Gershgorin, K.Yu. Gorbunov. Chromosome structures: reduction of certain problems with unequal gene content and gene paralogs to integer linear programming. BMC Bioinformatics, Dec 6 2017, Vol. 18, Article 537, 18 pp.
    DOI: 10.1186/s12859-017-1944-x, WOS000417558100001, Scopus: 2-s2.0-85043231032, PMID29212445, ISTINA: 88753567. $ RSF 14-50-00150.
  56. [Scopus] R.A. Gershgorin, K.Yu. Gorbunov, O.A. Zverkov, L.I. Rubanov, A.V. Seliverstov, V.A. Lyubetsky. Highly conserved elements and chromosome structure evolution in mitochondrial genomes in ciliates. Life, Feb 27 2017, Vol. 7, Iss. 1, Article 9, 11 pp.
    DOI: 10.3390/life7010009, Scopus: 2-s2.0-85016311163, PMID28264444, eLIBRARY: 29483092, ISTINA: 87046898. $ RSF 14-50-00150. i,
  57. [Q1 4.5 WoS] V.A. Lyubetsky, D.D. Korotkova, A.S. Ivanova, L.I. Rubanov, A.V. Seliverstov, O.A. Zverkov, A.M. Nesterenko, M.B. Tereshina, A.G. Zaraisky. Novel transmembrane protein c-Answer revealed by bioinformatic screening of genes present only in well regenerating animals. FEBS Journal, Sep 8 2017, Vol. 284, Iss. S1, P. 155.
    DOI: 10.1111/febs.14174, WOS000409918902164, ISTINA: 87047101. $ RSF 14-50-00150. i, ,
  58. [Q3 1.9 WoS] D.D. Korotkova, A.S. Ivanova, V.A. Lyubetsky, A.V. Seliverstov, N.Yu. Martynova, A.M. Nesterenko, M.B. Tereshina, A.G. Zaraisky. Novel FGF-signaling modulator c-Answer revealed by bioinformatics screening for genes present only in well-regenerative animals. Mechanisms of Development, Jul 2017, Vol. 145, P. S49.
    DOI: 10.1016/j.mod.2017.04.089, WOS000402994800164, ISTINA: 88754398,
  59. [Q1 3.9 WoS] K.V. Mikhailov, T.G. Simdyanov, V.V. Aleoshin. Genomic survey of a hyperparasitic microsporidian Amphiamblys sp. (Metchnikovellidae). Genome Biology and Evolution, Mar 1 2017, Vol. 9, Iss. 3, P. 454–467.
    DOI: 10.1093/gbe/evw235, WOS000402095700005, Scopus: 2-s2.0-85019712479, PMID27694476, eLIBRARY: 31029143, ISTINA: 28792492. $ RSF 14-50-00029.
  60. [Q2 2.1 WoS] T.G. Simdyanov, L. Guillou, A.Yu. Diakin, K.V. Mikhailov, J. Schrevel, V.V. Aleoshin. A new view on the morphology and phylogeny of eugregarines suggested by the evidence from the gregarine Ancora sagittata (Leuckart, 1860) Labbe, 1899 (Apicomplexa: Eugregarinida). PeerJ, May 30 2017, Vol. 5, e3354.
    DOI: 10.7717/peerj.3354, WOS000402559800002, Scopus: 2-s2.0-85019759933, PMID28584702, eLIBRARY: 31048639, ISTINA: 60525047. $ RSF 14-50-00029.
  61. [Q3 2.6 WoS] S.A. Karpov, K.S. Mamanazarova, O.V. Popova, V.V. Aleoshin, T.Y. James, M.A. Mamkaeva, V.S. Tcvetkova, A.E. Vishnyakov, J.E. Longcore. Monoblepharidomycetes diversity includes new parasitic and saprotrophic species with highly intronized rDNA. Fungal Biology, Aug 2017, Vol. 121, Iss. 8, P. 729–741.
    DOI: 10.1016/j.funbio.2017.05.002, WOS000406735600008, Scopus: 2-s2.0-85020461463, PMID28705399, eLIBRARY: 31038439, ISTINA: 60648835. $ RSF 14-50-00029.
  62. [Q4 1.7 WoS] G.A. Shilovsky, S.I. Shram, G.V. Morgunova, A.N. Khokhlov. Protein poly(ADP-ribosyl)ation system: Changes in development and aging as well as due to restriction of cell proliferation. Biochemistry (Moscow), Nov 2017, Vol. 82, Iss. 11, P. 1391–1401.
    DOI: 10.1134/S0006297917110177, WOS000415208200017, Scopus: 2-s2.0-85034236760, PMID29223166, eLIBRARY: 31053423, ISTINA: 83071581,
  63. [Q4 1.7 WoS] G.A. Shilovsky, T.S. Putyatina, V.V. Ashapkin, O.S. Luchkina, A.V. Markov. Coefficient of variation of lifespan across the tree of life: Is it a signature of programmed aging?. Biochemistry (Moscow), Dec 2017, Vol. 82, Iss. 12, P. 1480–1492.
    DOI: 10.1134/S0006297917120070, WOS000418054800007, Scopus: 2-s2.0-85038429930, PMID29486698, ISTINA: 91416102,
  64. [РИНЦ+ВАК] G.A. Shilovsky, S.I. Shram, A.N. Khokhlov. Anti-aging medicine and poly(ADP-ribose) polymerases: Activate or inhibit?. Clinical Gerontology, 2017, Vol. 23, No. 9-10, P. 76–78, in Russian.
    eLIBRARY: 29963163
  65. [РИНЦ+ВАК] G.A. Shilovsky, T.S. Putyatina, V.V. Ashapkin, O.S. Luchkina, B.F. Vanyushin. New testing methods of medicaments and geroprotectors for people of advanced age. Clinical Gerontology, 2017, Vol. 23, No. 9-10, P. 78–79, in Russian.
    eLIBRARY: 29963164
  66. [Q3 .6 WoS] V.G. Kanovei, V.A. Lyubetsky. A generic property of the Solovay set Σ. Siberian Mathematical Journal, Nov 2017, Vol. 58, Iss. 6, P. 1012–1014.
    DOI: 10.1134/S0037446617060106, WOS000425153500010, Scopus: 2-s2.0-85042169573, ISTINA: 88755250. $ RFBR 13–01–00006, 17–01–00705, RSF 14–50–00150.
  67. [Q3 .6 WoS] V.G. Kanovei, V.A. Lyubetsky. A countable definable set containing no definable elements. Mathematical Notes, Sep 2017, Vol. 102, Iss. 3–4, P. 338–349.
    DOI: 10.1134/S0001434617090048, WOS000413455100004, Scopus: 2-s2.0-85032274221, eLIBRARY: 31091804, ISTINA: 87048672. $ RFBR 13-01-00006, 17-01-00705, RSF 14-50-00150.
  68. [Q3 .5 WoS] M. Golshani, V.G. Kanovei, V.A. Lyubetsky. A Groszek-Laver pair of undistinguishable E0-classes. Mathematical Logic Quarterly, Apr 2017, Vol. 63, Iss. 1–2, P. 19–31.
    DOI: 10.1002/malq.201500020, WOS000400361900002, Scopus: 2-s2.0-85017391646, eLIBRARY: 29498577, ISTINA: 87048441. $ RFBR 13-01-00006, RSF 14-50-00150.
  69. [Q3 .5 WoS] K.Yu. Gorbunov, V.A. Lyubetsky. The minimum-cost transformation of graphs. Doklady Mathematics, Sep 2017, Vol. 96, No. 2, P. 503–505.
    DOI: 10.1134/S1064562417050313, WOS000415856500023, Scopus: 2-s2.0-85035050622, ISTINA: 87048830,
  70. [Q4 .4 WoS] K.Yu. Gorbunov, V.A. Lyubetsky. Linear algorithm for minimal rearrangement of structures. Problems of Information Transmission, Jan 2017, Vol. 53, Iss. 1, P. 55–72.
    DOI: 10.1134/S0032946017010057, WOS000399821500005, Scopus: 2-s2.0-85018193412, ISTINA: 87048959. $ RSF 14-50-00150.
  71. [Q4 .4 WoS] K.Yu. Gorbunov, V.A. Lyubetsky. A linear algorithm for the shortest transformation of graphs with different operation costs. Journal of Communications Technology and Electronics, Jun 2017, Vol. 62, No. 6, P. 653–662.
    DOI: 10.1134/S1064226917060092, WOS000406306000018, Scopus: 2-s2.0-85024099889, eLIBRARY: 31057587, ISTINA: 87048972. $ RSF 14-50-00150.
  72. [Q4 .4 WoS] L.I. Rubanov, A.V. Seliverstov. Projective-invariant description of a meandering river. Journal of Communications Technology and Electronics, 2017, Vol. 62, No. 6, P. 663–668.
    DOI: 10.1134/S1064226917060201, WOS000406306000019, Scopus: 2-s2.0-85024089400, eLIBRARY: 31060628,
  73. [Scopus] K.Yu. Gorbunov, V.A. Lyubetsky. Algorithm of transformation of a graph into another one with minimal cost. Informatics and Applications, Jan–Mar 2017, Vol. 11, Iss. 1, P. 79–89, in Russian.
    DOI: 10.14357/19922264170107, Scopus: 2-s2.0-85028801879, eLIBRARY: 29159457, Mi: ia461, ISTINA: 87049001. $ RSF 14-50-00150
  74. [Q2 .7 WoS] P. Blaszczyk, V.G. Kanovei, M.G. Katz, D. Sherry. Controversies in the Foundations of Analysis: Comments on Schubring’s Conflicts. Foundations of Science, Mar 2017, Vol. 22, Iss. 1, P. 125–140.
    DOI: 10.1007/s10699-015-9473-4, WOS000394258500004, Scopus: 2-s2.0-84951766324, eLIBRARY: 29447240. $ RFBR 13-01-00006.
  75. [Q2 .7 WoS] P. Blaszczyk, V.G. Kanovei, K.U. Katz, M.G. Katz, T. Kudryk, T. Mormann, D. Sherry. Is Leibnizian calculus embeddable in first order logic?. Foundations of Science, Dec 2017, Vol. 22, Iss. 4, P. 717–731.
    DOI: 10.1007/s10699-016-9495-6, WOS000414693600004, Scopus: 2-s2.0-84975526213, eLIBRARY: 31037398,
  76. [Q2 .7 WoS] P. Blaszczyk, V.G. Kanovei, K.U. Katz, M.G. Katz, S.S. Kutateladze, D. Sherry. Toward a history of mathematics focused on procedures. Foundations of Science, Dec 2017, Vol. 22, Iss. 4, P. 763–783.
    DOI: 10.1007/s10699-016-9498-3, WOS000414693600007, Scopus: 2-s2.0-84988662718, eLIBRARY: 30985328,
  77. [WoS] J. Bair, P. Blaszczyk, R. Ely, V. Henry, V.G. Kanovei, K.U. Katz, M.G. Katz, S.S. Kutateladze, T. McGaffey, P. Reeder, D.M. Schaps, D. Sherry, S. Shnider. Interpreting the infinitesimal mathematics of Leibniz and Euler. Journal for General Philosophy of Science, Jun 2017, Vol. 48, Iss. 2, P. 195–238.
    DOI: 10.1007/s10838-016-9334-z, WOS000403472000003, Scopus: 2-s2.0-84978654577, eLIBRARY: 31017552,
  78. [WoS] P. Fletcher, K. Hrbacek, V.G. Kanovei, M.G. Katz, C. Lobry, S. Sanders. Approaches to analysis with infinitesimals following Robinson, Nelson, and Others. Real Analysis Exchange, Fall 2017, Vol. 42, No. 2, P. 193–252.
    DOI: 10.14321/realanalexch.42.2.0193, WOS000431996500001, Scopus: 2-s2.0-85035096829. $ RFBR 17-01-00705
  79. [WoS] V.G. Kanovei, M.G. Katz. A positive function with vanishing Lebesgue integral in Zermelo–Fraenkel set theory. Real Analysis Exchange, Fall 2017, Vol. 42, No. 2, P. 385–390.
    DOI: 10.14321/realanalexch.42.2.0385, WOS000431996500008, Scopus: 2-s2.0-85041594711. $ RFBR 17-01-00705.
  80. [Scopus] J. Bair, P. Blaszczyk, R. Ely, V. Henry, V.G. Kanovei, K.U. Katz, M.G. Katz, T. Kudryk, S.S. Kutateladze, T. McGaffey, T. Mormann, D.M. Schaps, D. Sherry. Cauchy, infinitesimals and ghosts of departed quantifiers. Matematychni Studii, Fall 2017, Vol. 47, No. 2, P. 115–144.
    DOI: 10.15330/ms.47.2.115-144, Scopus: 2-s2.0-85035096937, eLIBRARY: 31143940. $ RFBR 17-01-00705. i,
  81. V.G. Kanovei. On “star” schemata of Kossak and Paris. In: Logic Colloquium '96, Lecture Notes in Logic, Cambridge University Press, 2017, P. 101–114.
    DOI: 10.1017/9781316716816.005
  82. [WoS] A.V. Seliverstov. On probabilistic algorithm for solving almost all instances of the set partition problem. In: Weil P. (eds) Computer Science – Theory and Applications. CSR 2017, Lecture Notes in Computer Science, Springer, Cham, 2017, Vol. 10304, P. 285–293.
    DOI: 10.1007/978-3-319-58747-9_25, Scopus: 2-s2.0-85019218199, eLIBRARY: 31026569. $ RSF 14-50-00150.
  83. [Scopus] A.V. Seliverstov. On tangent lines to affine hypersurfaces. Vestnik Udmurtskogo Universiteta: Matematika, Mekhanika, Komp'yuternye Nauki, 2017, Vol. 27, No. 2, P. 248–256, in Russian.
    DOI: 10.20537/vm170208, Scopus: 2-s2.0-85021873162, eLIBRARY: 29410196, Mi: vuu584. $ RSF 14-50-00150
  84. [РИНЦ+ВАК] A.V. Seliverstov. On search for singular points of algebraic curve. Geometry and Graphics, 2017, Vol. 5, No. 1, P. 36–42, in Russian.
    eLIBRARY: 28944892
  85. [РИНЦ] A.V. Seliverstov. Descriptive geometry for teaching of mathematics. Problems of Quality of Graphical Training of Students in a Technical University: Traditions and Innovations, 2017, Vol. 1, P. 346–352, in Russian.
    eLIBRARY: 29959926
  86. Abstracts

  87. No English citation is currently avaliable for this publication.
    Д.Д. Короткова, А.С. Иванова, В.А. Любецкий, А.В. Селиверстов, А.М. Нестеренко, М.Б. Терёшина, А.Г. Зарайский. Роль нового трансмембранного белка холоднокровных c-Answer в регенерации и развитии мозга у шпорцевой лягушки. в книге Перспективные направления физико-химической биологии и биотехнологии, Сборник тезисов, Москва, 7–10 февраля 2017, стр. 25–26.
    eLIBRARY28808988,
  88. V.A. Lyubetsky, L.I. Rubanov, K.Yu. Gorbunov, O.A. Zverkov, A.V. Seliverstov. Highly conserved elements in mitochondrial genomes of ciliates and monocots. Materials of the IX International Congress “Biotechnology: State of the Art and Prospects of Development”, Moscow, Russia, February 20–22 2017, Part 1, P. 393.
    eLIBRARY: 29220438,
  89. V.A. Lyubetsky, R.A. Gershgorin, L.I. Rubanov, A.V. Seliverstov, O.A. Zverkov. Evolution and systematics of plastids of rhodophytic branch. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’17, Moscow, Russia, July 27–30 2017, P. 48.
    eLIBRARY: 32563226. $ RSF 14-50-00150. i,
  90. O.A. Zverkov, K.V. Mikhailov, L.Yu. Rusin, V.A. Lyubetsky, V.V. Aleoshin. Phylogenomic evidence disentangles affinities of the Mesozoa. Proceedings of the 4th International Congress on Invertebrate Morphology (ICIM4), Moscow, Russia, August 18–23 2017, P. 55.
    $ RSF 14-50-00150. i,
  91. A.V. Seliverstov. An approach to the set partition problem. International Conference Polynomial Computer Algebra '2017, Russian Academy of Sciences, St. Petersburg Department of Steklov Mathematical Institute, Euler International Mathematical Institute, April 17–22 2017, St. Petersburg, Russia, Ed. by N. N. Vassiliev, VVM Publishing, 2017, P. 96–99, i,
  92. V.G. Kanovei. The full basis theorem does not imply analytic wellordering. ASL European Summer Meeting Logic Colloquium 2017, Stockholm University, 14–20 August 2017, Programme and Abstracts, P. 136–137, i,
  93. A.V. Seliverstov. Looking for points on a smooth cubic hypersurface. Computer algebra: International Conference Matherials, Moscow, Russia, October 30 – November 3 2017, Ed. S.A. Abramov, T.M. Sadykov, Moscow: Plekhanov Russian University of Economics, 2017, P. 158–164, in Russian
  94. No English citation is currently avaliable for this publication.
    А.В. Селиверстов. Эффективная унирациональность кубической гиперповерхности. Труды 60-й Всероссийской научной конференции МФТИ, Прикладная математика и информатика, 20–26 ноября 2017, стр. 173–175, i,
  95. Preprints

  96. V.G. Kanovei, V.A. Lyubetsky. The full basis theorem does not imply analytic wellordering. Eprint, arXiv:1702.03566v2 [math.LO], 12/20 Feb 2017, 62 pp., i,
  97. P. Fletcher, K. Hrbacek, V.G. Kanovei, M.G. Katz, C. Lobry, S. Sanders. Approaches to analysis with infinitesimals following Robinson, Nelson, and others. Eprint, arXiv:1703.00425 [math.CA], 1 Mar 2017, 54 pp., i,
  98. T. Bascelli, P. Blaszczyk, A. Borovik, V.G. Kanovei, K.U. Katz, M.G. Katz, S.S. Kutateladze, T. McGaffey, D.M. Schaps, D. Sherry. Cauchy's infinitesimals, his sum theorem, and foundational paradigms. Eprint, arXiv:1704.07723 [math.HO], 25 Apr / 9 May 2017, 42 pp., i,
  99. V.G. Kanovei, M.G. Katz. A positive function with vanishing Lebesgue integral in Zermelo-Fraenkel set theory. Eprint, arXiv:1705.00493 [math.CA], 1 May 2017, i,
  100. V.G. Kanovei, V.A. Lyubetsky. Definable E0 classes at arbitrary projective levels. Eprint, arXiv:1705.02975 [math.LO], 8 May 2017, i,
  101. F.S. Herzberg, V.G. Kanovei, M.G. Katz, V.A. Lyubetsky. Minimal axiomatic frameworks for definable hyperreals with transfer. Eprint, arXiv:1707.00202 [math.LO], 1 Jul 2017, i,
  102. V.G. Kanovei, V.A. Lyubetsky. Definable minimal collapse functions at arbitrary projective levels. Eprint, arXiv:1707.07320 [math.LO], 23 Jul 2017, 30 pp., i,
  103. J. Bair, P. Blaszczyk, R. Ely, V. Henry, V.G. Kanovei, K.U. Katz, M.G. Katz, T. Kudryk, S.S. Kutateladze, T. McGaffey, T. Mormann, D.M. Schaps, D. Sherry. Cauchy, infinitesimals and ghosts of departed quantifiers. Eprint, arXiv:1712.00226 [math.HO], 1 Dec 2017, 45 pp., i,
  104. V.G. Kanovei, V.A. Lyubetsky. Non-uniformizable sets with countable cross-sections on a given level of the projective hierarchy. Eprint, arXiv:1712.00769v1 [math.LO], 3 Dec 2017, i,
  105. Other

  106. V.A. Lyubetsky. Mathematical and computer science problems in bioinformatics. GraphHPC: Сonference on Parallel LargeSscale Graph Processing, Moscow, Russia, March 2 2017, oral presentation
  107. V.G. Kanovei, V.A. Lyubetsky. Definable minimal collapse functions at arbitrary projective levels. Descriptive Set Theory in Turin, Turin, Italy, September 6–8 2017, oral presentation, i,
  108. A.V. Seliverstov. On probabilistic algorithm for solving almost all instances of the set partition problem. 12th International Computer Science Symposium in Russia (CSR 2017), Kazan, Russia, June 8–12 2017, oral presentation, (CORE Rank C)
  109. 2016

    Books

  110. No English citation is currently avaliable for this publication.
    Д.В. Тихоненков, А.П. Мыльников, К.В. Михайлов, В.В. Алёшин. Ранняя филогения и эволюция альвеолят. Пенза: ПГУ, 2016, 166 стр., ISBN 978-5-906913-21-0
  111. Articles

  112. [Q1 2.6 WoS] S.A. Korolev, O.A. Zverkov, A.V. Seliverstov, V.A. Lyubetsky. Ribosome reinitiation at leader peptides increases translation of bacterial proteins. Biology Direct, Apr 16 2016, Vol. 11, Article 20.
    DOI: 10.1186/s13062-016-0123-8, WOS000374523200001, Scopus: 2-s2.0-84963540230, PMID27084079, eLIBRARY: 27003448, ePDF: rdcu.be/6m2x. $ RSF 14-50-00150. i,
  113. [Q1 2.2 WoS] V.A. Lyubetsky, R.A. Gershgorin, A.V. Seliverstov, K.Yu. Gorbunov. Algorithms for reconstruction of chromosomal structures. BMC Bioinformatics, Jan 19 2016, Vol. 17, Article 40, 23 pp.
    DOI: 10.1186/s12859-016-0878-z, WOS000368414800001, Scopus: 2-s2.0-84954341725, PMID26780836, eLIBRARY: 28465238, ePDF: rdcu.be/6ild. $ RSF 14-50-00150. i,
  114. [Q1 2.2 WoS] L.I. Rubanov, A.V. Seliverstov, O.A. Zverkov, V.A. Lyubetsky. A method for identification of highly conserved elements and evolutionary analysis of superphylum Alveolata. BMC Bioinformatics, Sep 20 2016, Vol. 17, Article 385, 16 pp.
    DOI: 10.1186/s12859-016-1257-5, WOS000383404500001, Scopus: 2-s2.0-84988489465, PMID27645252, eLIBRARY: 27576567. $ RSF 14-50-00150. i,
  115. [Scopus] O.A. Zverkov, A.V. Seliverstov, V.A. Lyubetsky. Regulation of expression and evolution of genes in plastids of rhodophytic branch. Life, Jan 29 2016, Vol. 6, Iss. 1, Article 7, 13 pp.
    DOI: 10.3390/life6010007, Scopus: 2-s2.0-84957874701, PMID26840333, eLIBRARY: 27032554. $ RSF 14-50-00150. i,
  116. [Scopus] K.Yu. Gorbunov, V.A. Lyubetsky. A modified algorithm for transformation of chromosomal structures: a condition of absolute exactness. CEUR Workshop Proceedings, 2016, Vol. 1763, P. 162–172, in Russian.
    Scopus: 2-s2.0-85009415092, eLIBRARY: 29474284, ISTINA: 87049057. $ РНФ 14-50-00150. i,
  117. [Scopus] S.A. Korolev, K.Yu. Gorbunov, O.A. Zverkov, A.V. Seliverstov, V.A. Lyubetsky. Degenerate inverted repeats in the genomes of mycobacterium. CEUR Workshop Proceedings, 2016, Vol. 1763, P. 182–187, in Russian.
    Scopus: 2-s2.0-85009399359, eLIBRARY: 29477080, ISTINA: 87047396. $ РНФ 14-50-00150. i,
  118. [Q1 9.3 WoS] K.V. Mikhailov, G.S. Slyusarev, M.A. Nikitin, M.D. Logacheva, A.A. Penin, V.V. Aleoshin, Y.V. Panchin. The genome of Intoshia linei affirms orthonectids as highly simplified spiralians. Current Biology, Jul 11 2016, Vol. 26, Iss. 13, P. 1768–1774.
    DOI: 10.1016/j.cub.2016.05.007, WOS000384799500045, Scopus: 2-s2.0-84978496387, PMID27374341, eLIBRARY: 27059215. $ RSF 14-50-00150. i,
  119. [Q1 4.0 WoS] V.V. Aleoshin, A.P. Mylnikov, G.S. Mirzaeva, K.V. Mikhailov, S.A. Karpov. Heterokont predator Develorapax marinus gen. et sp. nov. – A model of the ochrophyte ancestor. Frontiers in Microbiology, Aug 3 2016, Vol. 7, Article 1194.
    DOI: 10.3389/fmicb.2016.01194, WOS000380655100003, Scopus: 2-s2.0-84988878438, PMID27536283, eLIBRARY: 27569575,
  120. [Q1 3.7 WoS] E.V. Romanova, V.V. Aleoshin, R.M. Kamaltynov, K.V. Mikhailov, M.D. Logacheva, E.A. Sirotinina, A.Yu. Gornov, A.S. Anikin, D.Yu. Sherbakov. Evolution of mitochondrial genomes in Baikalian amphipods. BMC Genomics, Dec 28 2016, Vol. 17, No. 14, Article 1016.
    DOI: 10.1186/s12864-016-3357-z, WOS000416074600007, Scopus: 2-s2.0-85007449330, PMID28105939, eLIBRARY: 28101069. $ RSF 14-50-00029. i,
  121. [Q1 2.8 WoS] O.V. Popova, K.V. Mikhailov, M.A. Nikitin, M.D. Logacheva, A.A. Penin, M.S. Muntyan, O.S. Kedrova, N.B. Petrov, Y.V. Panchin, V.V. Aleoshin. Mitochondrial genomes of kinorhyncha: trnM duplication and new gene orders within animals. PLoS ONE, Oct 18 2016, Vol. 11, No. 10, e0165072.
    DOI: 10.1371/journal.pone.0165072, WOS000386203800054, Scopus: 2-s2.0-84992431163, PMID27755612, eLIBRARY: 27580810. $ RSF 14-50-00150.
  122. [Q2 2.7 WoS] A. Diakin, G.G. Paskerova, T.G. Simdyanov, V.V. Aleoshin, A. Valigurova. Morphology and molecular phylogeny of coelomic gregarines (Apicomplexa) with different types of motility: Urospora ovalis and U. travisiae from the polychaete Travisia forbesii. Protist, Jun 2016, Vol. 167, No. 3, P. 279–301.
    DOI: 10.1016/j.protis.2016.05.001, WOS000378578900006, Scopus: 2-s2.0-84970006305, PMID27239726, eLIBRARY: 27155324,
  123. [Q2 2.6 WoS] V.A. Lyubetsky, W.H. Piel, P.F. Stadler. Molecular Phylogenetics 2016. BioMed Research International, 2016, Vol. 2016, Article ID 9029306.
    DOI: 10.1155/2016/9029306, WOS000392057400001, Scopus: 2-s2.0-85009380916, PMID28127550, eLIBRARY: 29475657,
  124. [Q4 1.7 WoS] G.A. Shilovsky, T.S. Putyatina, S.N. Lysenkov, V.V. Ashapkin, O.S. Luchkina, A.V. Markov, V.P. Skulachev. Is it possible to prove the existence of an aging program by quantitative analysis of mortality dynamics?. Biochemistry (Moscow), Dec 2016, Vol. 81, Iss. 12, P. 1461–1476.
    DOI: 10.1134/S0006297916120075, WOS000390092900007, Scopus: 2-s2.0-85006266092, PMID28259123, eLIBRARY: 29474048, ISTINA: 36565732,
  125. [Q4 1.0 WoS] L.Yu. Rusin. Metagenomics and biodiversity of sphagnum bogs. Molecular Biology, Sep 2016, Vol. 50, No. 5, P. 645–648.
    DOI: 10.1134/S0026893316050150, WOS000386568600002, Scopus: 2-s2.0-84991584961, eLIBRARY: 27582776, ISTINA: 29998716,
  126. [Q4 .9 WoS] E.V. Romanova, K.V. Mikhailov, M.D. Logacheva, R.M. Kamaltynov, V.V. Aleoshin, D.Y. Sherbakov. The complete mitochondrial genome of Baikalian amphipoda Eulimnogammarus vittatus Dybowsky, 1874. Mitochondrial DNA Part A, May 2016, Vol. 27, Iss. 3, P. 1795–1797.
    DOI: 10.3109/19401736.2014.963817, WOS000377538000100, Scopus: 2-s2.0-85007501409, PMID25264843,
  127. [Q4 .9 WoS] E.V. Romanova, K.V. Mikhailov, M.D. Logacheva, R.M. Kamaltynov, V.V. Aleoshin, D.Yu. Sherbakov. The complete mitochondrial genome of a deep-water Baikalian amphipoda Brachyuropus grewingkii (Dybowsky, 1874). Mitochondrial DNA Part A, Nov 2016, Vol. 27, Iss. 6, P. 4158–4159.
    DOI: 10.3109/19401736.2014.1003891, WOS000393307200128, Scopus: 2-s2.0-85003582759, PMID25600751, eLIBRARY: 29474579,
  128. [РИНЦ+ВАК] T.S. Panfilkina, T.G. Simdyanov, V.V. Aleoshin, G.G. Paskerova. Agamococcidians: coccidians or gregarines? New species and new data on the phylogenetic position of the group. Protistology, 2016, Vol. 10, No. 2, P. 56–57.
    eLIBRARY: 26549038,
  129. B.D. Efeykin, K.V. Mikhailov, O.V. Popova, V.V. Aleshin, S.E. Spiridonov, Y.V. Panchin. New insights to the Nematomorpha taxonomy in light of molecular data. In: Contemporary Problems of Theoretical and Marine Parasitology, Collection of scientific papers, Eds.: К.V. Galaktionov, А.V. Gaevskaya., Sevastopol, Bondarenko Publishing, 2016, P. 28–30, in Russian.
    eLIBRARY: 27547509
  130. K.V. Mikhailov, G.S. Slyusarev, M.A. Nikitin, M.D. Logacheva, A.A. Penin, V.V. Aleoshin, Y.V. Panchin. The genome of Intoshia linei affirms orthonectids as highly simplified spiralians. In: Contemporary Problems of Theoretical and Marine Parasitology, Collection of scientific papers, Eds.: К.V. Galaktionov, А.V. Gaevskaya., Sevastopol, Bondarenko Publishing, 2016, P. 44–45, in Russian.
    eLIBRARY: 27547516
  131. T.S. Panfilkina, G.G. Paskerova, T.G. Simdyanov, V.V. Aleoshin. New members and phylogenetic position of agamococcidians (Apicomplexa: Agamococcidiorida). In: Contemporaryproblemsoftheoreticalandmarineparasitology, Collection of scientific papers, Eds.: К.V. Galaktionov, А.V. Gaevskaya., Sevastopol, Bondarenko Publishing, 2016, P. 49–50, in Russian.
    eLIBRARY: 27547518
  132. [РИНЦ+ВАК] No English citation is currently avaliable for this publication.
    С.А. Королев, К.Ю. Горбунов, О.А. Зверков, А.В. Селиверстов, В.А. Любецкий. Вырожденные инвертированные повторы в геномах микобактерий. Современные информационные технологии и ИТ-образование, 2016, том 12, № 1, стр. 182–187.
    eLIBRARY27539233. $ РНФ 14-50-00150.
  133. [РИНЦ+ВАК] No English citation is currently avaliable for this publication.
    Л.И. Рубанов, О.А. Зверков, А.В. Селиверстов, В.А. Любецкий. Высоко консервативные элементы в митохондриях однодольных растений. Современные информационные технологии и ИТ-образование, 2016, том 12, № 2, стр. 211–215.
    eLIBRARY28151042,
  134. [Q1 1.0 WoS] V.G. Kanovei, V.A. Lyubetsky. Counterexamples to countable-section Π21 uniformization and Π31 separation. Annals of Pure and Applied Logic, Mar 2016, Vol. 167, No. 3, P. 262–283.
    DOI: 10.1016/j.apal.2015.12.002, WOS000368208900005, Scopus: 2-s2.0-84953218395, eLIBRARY: 26853147. $ RFFI 13-01-00006, RSF 14-50-00150.
  135. [Q3 .6 WoS] V.G. Kanovei, V.A. Lyubetsky. On countable cofinality and decomposition of definable thin orderings. Fundamenta mathematicae, 2016, Vol. 235, P. 13–36.
    DOI: 10.4064/fm977-10-2015, WOS000387102600002, Scopus: 2-s2.0-84983356306, eLIBRARY: 27136881. $ RSF 14-50-00150. i,
  136. [Q4 .4 WoS] V.A. Lyubetsky, A.V. Seliverstov. A Novel Algorithm for Solution of a Combinatory Set Partitioning Problem. Journal of Communications Technology and Electronics, Jun 2016, Vol. 61, No. 6, P. 705–708.
    DOI: 10.1134/S1064226916060152, WOS000379343100017, Scopus: 2-s2.0-84977119890, eLIBRARY: 26841168. $ RSF 14-50-00150.
  137. [WoS] P. Blaszczyk, A. Borovik, V.G. Kanovei, M.G. Katz, T. Kudryk, S.S. Kutateladze, D. Sherry. A Non-Standard Analysis of a Cultural Icon: The Case of Paul Halmos. Logica Universalis, Dec 2016, Vol. 10, Iss. 4, P. 393–405.
    DOI: 10.1007/s11787-016-0153-0, WOS000411397100001, Scopus: 2-s2.0-84978036267, eLIBRARY: 28444203,
  138. [WoS] T. Bascelli, P. Blaszczyk, V.G. Kanovei, K.U. Katz, M.G. Katz, D.M. Schaps, D. Sherry. Leibniz versus Ishiguro: Closing a Quarter Century of Syncategoremania. HOPOS: The Journal of the International Society for the History of Philosophy of Science, Spr 2016, Vol. 6, Iss. 1, P. 117–147.
    DOI: 10.1086/685645, WOS000377144100005. $ RFBR 13-01-00006.
  139. V.G. Kanovei, K.U. Katz, M.G. Katz, T. Nowik. Small oscillations of the pendulum, Euler’s method, and adequality. Quantum Studies: Mathematics and Foundations, Sep 2016, Vol. 3, Iss. 3, P. 231–236.
    DOI: 10.1007/s40509-016-0074-x,
  140. [РИНЦ+ВАК] A.V. Seliverstov. On symmetry of projective curves. Vestnik TvGU. Seriya: Prikladnaya Matematika, 2016, No. 3, P. 59–66, in Russian.
    DOI: 10.26456/vtpmk21, eLIBRARY: 27310776, Mi: vtpmk21,
  141. [РИНЦ] No English citation is currently avaliable for this publication.
    К.Ю. Горбунов, В.А. Любецкий. Линейный алгоритм кратчайшей перестройки графов при разных ценах операций. Информационные процессы, 2016, том 16, № 2, стр. 223–236.
    eLIBRARY26181047. $ РНФ 14-50-00150. i,
  142. [РИНЦ] No English citation is currently avaliable for this publication.
    Л.И. Рубанов, А.В. Селиверстов. Проективно-инвариантное описание излучины реки. Информационные процессы, 2016, том 16, № 3, стр. 281–290.
    eLIBRARY27524319, i,
  143. [РИНЦ+ВАК] No English citation is currently avaliable for this publication.
    К.Ю. Горбунов, В.А. Любецкий. Модифицированный алгоритм преобразования хромосомных структур: условия абсолютной точности. Современные информационные технологии и ИТ-образование, 2016, том 12, № 1, стр. 162–172.
    eLIBRARY27539231. $ РНФ 14-50-00150.
  144. Abstracts

  145. V.A. Lyubetsky, S.A. Korolev, O.A. Zverkov, A.V. Seliverstov. Ribosome reinitiation at leader peptides increases translation of bacterial proteins. International Conference SocBiN Bioinformatics 2016, Abstracts of the 15th annual SocBiN conference, Moscow, Russia, June 14–16 2016, P. 26–28, i,
  146. O.A. Zverkov, L.Yu. Rusin, V.A. Lyubetsky, V.V. Aleoshin. Problem of phylogenetic position of dicyemids. Abstracts of the International Symposium "Cognitive Sciences, Genomics and Bioinformatics" (CSGB-2016), Novosibirsk, Russia, August 29–31 2016, P. 68,
  147. V.G. Kanovei. Some applications of finite-support products of Jensen's minimal forcing. Abstracts and slides of the Winter School in Abstract Analysis 2016, Hejnice, Czech Republic, Jan 30 – Feb 6 2016,
  148. A.V. Seliverstov. On cubic hypersurfaces with involutions. International Conference Polynomial Computer Algebra '2016, Russian Academy of Sciences, St. Petersburg Department of Steklov Mathematical Institute, Euler International Mathematical Institute, April 18-22 2016, St. Petersburg, VVM Publishing, 2016, P. 74–77.
    eLIBRARY: 26437524,
  149. No English citation is currently avaliable for this publication.
    А.В. Селиверстов. Начертательная геометрия для преподавания дискретной математики. Сборник научных трудов международной научно-технической конференции «Математические методы и модели: теория, приложения и роль в образовании», г. Ульяновск, Россия, 28–30 апреля 2016, ред. П.А. Вельмисов, Ульяновск: УлГТУ, 2016, часть 1, стр. 257–260.
    eLIBRARY29285945,
  150. A.V. Seliverstov. On smoothness recognition of the hypersurface. Proceedings of the 12th International Conference “Belarusian Mathematical Conference”, Minsk, Sep 5–10 2016, ed. S.G. Krasovskii, Minsk: Institute of Mathematics of the Belarusian National Academy of Sciences, 2016, part 4, P. 64–65, in Russian
  151. Preprints

  152. P. Blaszczyk, V.G. Kanovei, M.G. Katz, D. Sherry. Controversies in the foundations of analysis: Comments on Schubring's Conflicts. Eprint, arXiv:1601.00059 [math.HO], 1/31 Jan 2016, 24 pp., i,
  153. M. Golshani, V.G. Kanovei, V.A. Lyubetsky. A Groszek-Laver pair of undistinguishable E0 classes. Eprint, arXiv:1601.03477 [math.LO], 14 Jan 2016, 18 pp., i,
  154. V.G. Kanovei. OD elements of countable OD sets in the Solovay model. Eprint, arXiv:1603.04237 [math.LO], 14/15 Mar 2016, 20 pp., i,
  155. T. Bascelli, P. Blaszczyk, V.G. Kanovei, K.U. Katz, M.G. Katz, D.M. Schaps, D. Sherry. Leibniz vs Ishiguro: Closing a quarter-century of syncategoremania. Eprint, arXiv:1603.07209 [math.HO], 23 Mar 2016, 37 pp., i,
  156. V.G. Kanovei, K.U. Katz, M.G. Katz, T. Nowik. Small oscillations of the pendulum, Euler's method, and adequality. Eprint, arXiv:1604.06663 [math.HO], 13 Apr 2016, i,
  157. J. Bair, P. Blaszczyk, R. Ely, V. Henry, V.G. Kanovei, K.U. Katz, M.G. Katz, S.S. Kutateladze, T. McGaffey, P. Reeder, D.M. Schaps, D. Sherry, S. Shnider. Interpreting the infinitesimal mathematics of Leibniz and Euler. Eprint, arXiv:1605.00455 [math.HO], 2 May 2016, 62 pp., i,
  158. P. Blaszczyk, V.G. Kanovei, K.U. Katz, M.G. Katz, T. Kudryk, T. Mormann, D. Sherry. Is Leibnizian calculus embeddable in first order logic?. Eprint, arXiv:1605.03501 [math.LO], 11 May 2016, 22 pp., i,
  159. P. Blaszczyk, A. Borovik, V.G. Kanovei, M.G. Katz, T. Kudryk, S.S. Kutateladze, D. Sherry. A non-standard analysis of a cultural icon: The case of Paul Halmos. Eprint, arXiv:1607.00149 [math.HO], 1 Jul 2016, 15 pp., i,
  160. V.G. Kanovei. In Cohen generic extension, every countable OD set of reals belongs to the ground model. Eprint, arXiv:1607.02880 [math.LO], 11 Jul 2016, i,
  161. V.G. Kanovei, V.A. Lyubetsky. Countable OD sets of reals belong to the ground model. Eprint, arXiv:1609.01032 [math.LO], 5 Sep / 20 Nov 2016, 16 pp., i,
  162. P. Blaszczyk, V.G. Kanovei, K.U. Katz, M.G. Katz, S.S. Kutateladze, D. Sherry. Toward a history of mathematics focused on procedures. Eprint, arXiv:1609.04531 [math.HO], 15 Sep 2016, 30 pp., i,
  163. V.G. Kanovei, V.A. Lyubetsky. A generic property of Solovay's set Σ. Eprint, arXiv:1611.00176 [math.LO], 1 Nov 2016, i,
  164. T. Bascelli, P. Blaszczyk, V.G. Kanovei, K.U. Katz, M.G. Katz, S.S. Kutateladze, T. Nowik, D.M. Schaps, D. Sherry. Gregory's sixth operation. Eprint, arXiv:1612.05944 [math.HO], 18 Dec 2016, 17 pp., i,
  165. Other

  166. V.A. Lyubetsky, K.Yu. Gorbunov, A.V. Seliverstov. Optimization on graphs: clustering and reconciliation. GraphHPC: Сonference on Parallel LargeSscale Graph Processing, Moscow, Russia, March 3 2016, oral presentation
  167. V.G. Kanovei. Some applications of finite-support products of Jensen's minimal Δ31 forcing. Winter School in Abstract Analysis 2016, Hejnice, Czech Republic, Jan 30 – Feb 6 2016, oral presentation, i,
  168. No English citation is currently avaliable for this publication.
    А.В. Селиверстов. Об эвристическом вероятностном алгоритме для задачи о разбиении множества. 59-я Всероссийская научная конференция МФТИ, Долгопрудный, 26 ноября 2016, устный доклад, i
  169. 2015

    Articles

  170. [Q4 1.0 WoS] K.Yu. Gorbunov, R.A. Gershgorin, V.A. Lyubetsky. Rearrangement and Inference of Chromosome Structures. Molecular Biology, May 2015, Vol. 49, No. 3, P. 327–338.
    DOI: 10.1134/S0026893315030073, WOS000356371700001, Scopus: 2-s2.0-84935847255, eLIBRARY: 23988505. $ RSF 14-50-00150.
  171. [РИНЦ+ВАК] No English citation is currently avaliable for this publication.
    Л.И. Рубанов, А.В. Селиверстов, В.А. Любецкий. Широкомасштабный поиск ультраконсервативных элементов в полных геномах. Современные информационные технологии и ИТ-образование, 2015, том 2, № 11, стр. 586–593.
    eLIBRARY26167552. $ РНФ 14-50-00150.
  172. [РИНЦ+ВАК] No English citation is currently avaliable for this publication.
    К.Ю. Горбунов, В.А. Любецкий. Реконструкция предковых хромосомных структур. Современные информационные технологии и ИТ-образование, 2015, том 2, № 11, стр. 600–605.
    eLIBRARY26167554. $ РНФ 14-50-00150.
  173. [Q2 2.6 WoS] V.A. Lyubetsky, W.H. Piel, P.F. Stadler. Molecular Phylogenetics 2014. BioMed Research International, 2015, Vol. 2015, Article ID 919251.
    DOI: 10.1155/2015/919251, WOS000356347500001, Scopus: 2-s2.0-84934936193, PMID26161422, eLIBRARY: 23984753,
  174. [Q2 2.6 WoS] O.A. Zverkov, A.V. Seliverstov, V.A. Lyubetsky. A Database of Plastid Protein Families from Red Algae and Apicomplexa and Expression Regulation of the moeB Gene. BioMed Research International, 2015, Vol. 2015, Article ID 510598.
    DOI: 10.1155/2015/510598, WOS000356268600001, Scopus: 2-s2.0-84934923822, PMID26114108, eLIBRARY: 23984599. $ RFBR 13-04-40196-Н. i,
  175. [Q2 2.6 WoS] A.V. Seliverstov, O.A. Zverkov, S.N. Istomina, S.A. Pirogov, P.S. Kitsis. Comparative Analysis of Apicoplast-Targeted Protein Extension Lengths in Apicomplexan Parasites. BioMed Research International, 2015, Vol. 2015, Article ID 452958.
    DOI: 10.1155/2015/452958, WOS000356263000001, Scopus: 2-s2.0-84935006924, PMID26114107, eLIBRARY: 23985518. $ RSF 14-50-00150. i,
  176. [РИНЦ+ВАК] No English citation is currently avaliable for this publication.
    С.А. Королев, А.В. Селиверстов, О.А. Зверков, В.А. Любецкий. Классическая аттенюаторная регуляция, зависимая от концентрации триптофана, у актинобактерий. Современные информационные технологии и ИТ-образование, 2015, том 2, № 11, стр. 565–568.
    eLIBRARY26167546. $ РНФ 14-50-00150.
  177. [РИНЦ+ВАК] No English citation is currently avaliable for this publication.
    О.А. Зверков, А.В. Селиверстов, В.А. Любецкий. О транскрипционных факторах, кодируемых в пластидах родофитной ветви. Современные информационные технологии и ИТ-образование, 2015, том 2, № 11, стр. 571–575.
    eLIBRARY26167548. $ РНФ 14-50-00150.
  178. [РИНЦ+ВАК] No English citation is currently avaliable for this publication.
    Л.И. Рубанов, А.В. Селиверстов, О.А. Зверков, В.А. Любецкий. Ультраконсервативные элементы у простейших из надтипа Alveolata. Современные информационные технологии и ИТ-образование, 2015, том 2, № 11, стр. 581–585.
    eLIBRARY26167551. $ РНФ 14-50-00150.
  179. [РИНЦ+ВАК] No English citation is currently avaliable for this publication.
    С.А. Королев, А.В. Селиверстов, В.А. Любецкий. О трансляции рибосомного белка L16 в пластидах цветковых растений. Современные информационные технологии и ИТ-образование, 2015, том 2, № 11, стр. 606–607.
    eLIBRARY26167555. $ РНФ 14-50-00150.
  180. [Q4 1.7 WoS] K.V. Mikhailov, D.V. Tikhonenkov, J. Janouskovec, A.Yu. Diakin, M.V. Ofitserov, A.P. Mylnikov, V.V. Aleshin. Primary structure of 28S rRNA gene confirms monophyly of free-living heterotrophic and phototrophic apicomplexans (Alveolata). Biochemistry (Moscow), Nov 2015, Vol. 80, Iss. 11, P. 1492–1499.
    DOI: 10.1134/S0006297915110115, WOS000365274100011, Scopus: 2-s2.0-84947475560, PMID26615441, eLIBRARY: 24971911,
  181. [Q4 1.7 WoS] G.A. Shilovsky, T.S. Putyatina, A.V. Markov, V.P. Skulachev. Contribution of quantitative methods of estimating mortality dynamics to explaining mechanisms of aging. Biochemistry (Moscow), Dec 2015, Vol. 80, Iss. 12, P. 1547–1559.
    DOI: 10.1134/S0006297915120020, WOS000366491000002, Scopus: 2-s2.0-84949550945, PMID26638679, eLIBRARY: 26923207, ISTINA: 17286721,
  182. [Q4 1.7 WoS] G.A. Shilovsky, B.A. Feniouk, V.P. Skulachev. Thymic involution in ontogenesis: Role in aging program. Biochemistry (Moscow), Dec 2015, Vol. 80, Iss. 12, P. 1629–1631.
    DOI: 10.1134/S0006297915120135, WOS000366491000013, Scopus: 2-s2.0-84949544316, PMID26638690, eLIBRARY: 26923121, ISTINA: 11999528,
  183. [Q4 1.0 WoS] T.G. Simdyanov, A.Yu. Diakin, V.V. Aleoshin. Ultrastructure and 28S rDNA phylogeny of two gregarines: Cephaloidophora cf. communis and Heliospora cf. longissima with remarks on gregarine morphology and phylogenetic analysis. Acta Protozoologica, 2015, Vol. 54, No. 3, P. 241–263.
    DOI: 10.4467/16890027AP.15.020.3217, WOS000360378300008, Scopus: 2-s2.0-84938528596, eLIBRARY: 23995848,
  184. [Q1 2.3 WoS] V.G. Kanovei, V.A. Lyubetsky. Grossone approach to Hutton and Euler transforms. Applied Mathematics and Computation, Mar 15 2015, Vol. 255, P. 36–43.
    DOI: 10.1016/j.amc.2014.06.037, WOS000351676900005, Scopus: 2-s2.0-85027935393, eLIBRARY: 24010655. $ RFBR 13-01-00006. i,
  185. [Q3 .6 WoS] V.G. Kanovei, V.A. Lyubetsky. Generalization of one construction by Solovay. Siberian Mathematical Journal, Nov 2015, Vol. 56, Iss. 6, P. 1072–1079.
    DOI: 10.1134/S0037446615060117, WOS000367464500011, Scopus: 2-s2.0-84952911671, eLIBRARY: 26928676. $ RFBR 13-01-00006, RSF 14-50-00150.
  186. [Q3 .6 WoS] V.G. Kanovei, V.A. Lyubetsky. On effective σ-boundedness and σ-compactness in Solovay’s model. Mathematical Notes, Jul 2015, Vol. 98, Iss. 1, P. 273–282.
    DOI: 10.1134/S0001434615070299, WOS000360070400029, Scopus: 2-s2.0-84940102194, eLIBRARY: 24942013. $ RFBR 13-01-00006, RSF 14-50-00150.
  187. [Q3 .5 WoS] V.G. Kanovei, V.A. Lyubetsky. A definable E0 class containing no definable elements. Archive for Mathematical Logic, Aug 2015, Vol. 54, Iss. 5-6, P. 711–723.
    DOI: 10.1007/s00153-015-0436-9, WOS000358581600014, Scopus: 2-s2.0-84938997026, eLIBRARY: 24005243. $ RFFI 13-01-00006, RSF 14-50-00150.
  188. [Q2 .7 WoS] V.G. Kanovei, K.U. Katz, M.G. Katz, M. Schaps. Proofs and Retributions, Or: Why Sarah Can’t Take Limits. Foundations of Science, Mar 2015, Vol. 20, Iss. 1, P. 1–25.
    DOI: 10.1007/s10699-013-9340-0, WOS000349337400001, Scopus: 2-s2.0-85027917336, eLIBRARY: 24033304, eLIBRARY: 31054359. $ RFBR 13-01-00006. i,
  189. [Q4 .2 WoS] V.G. Kanovei, K.U. Katz, M.G. Katz, D. Sherry. Euler’s Lute and Edwards’s Oud. Mathematical Intelligencer, Dec 2015, Vol. 37, Iss. 4, P. 48–51.
    DOI: 10.1007/s00283-015-9565-6, WOS000366845100011, Scopus: 2-s2.0-84946430849, eLIBRARY: 29464529. $ RSF 14-50-00150, RFBR 13-01-00006.
  190. [Q4 .4 WoS] R.A. Gershgorin, L.I. Rubanov, A.V. Seliverstov. Easily Computable Invariants for Hypersurface Recognition. Journal of Communications Technology and Electronics, Dec 2015, Vol. 60, No. 12, P. 1429–1431.
    DOI: 10.1134/S1064226915120074, WOS000366638500018, Scopus: 2-s2.0-84950316787, eLIBRARY: 26925657. $ RSF 14-50-00150.
  191. [Q4 .4 WoS] A.A. Muchnik, K.Yu. Gorbunov. Algorithmic aspects of decomposition and equivalence of finite-valued transducers. Problems of Information Transmission, Jul 2015, Vol. 51, Iss. 3, P. 267–288.
    DOI: 10.1134/S0032946015030059, WOS000363254900005, Scopus: 2-s2.0-84944450762, eLIBRARY: 24961755. $ RSF 14-50-00150.
  192. [РИНЦ+ВАК] A.V. Seliverstov. A note on implicitly given hypergraphs. Tambov University Reports. Series: Natural and Technical Sciences, 2015, Vol. 20, No. 5, P. 1422–1424, in Russian.
    eLIBRARY: 24182950
  193. [Scopus] A.V. Seliverstov. Cubic forms without monomials in two variables. Bulletin of Udmurt University. Mathematics, Mechanics, Computer Science, 2015, Vol. 25, No. 1, P. 71–77, in Russian.
    eLIBRARY: 23142053, Mi: vuu466
  194. [WoS] I.V. Latkin, A.V. Seliverstov. Computational complexity of fragments of the theory of complex numbers. Bulletin of University of Karaganda. Mathematics, 2015, No. 1 (77), P. 47–55, in Russian.
    $ RFBR 13-04-40196-Н
  195. [РИНЦ] V.A. Lyubetsky, A.V. Seliverstov. On an algorithm for solving NP-complete problem, if there is no or odd number of solutions. International Journal of Open Information Technologies, International Journal of Open Information Technologies, 2015, Vol. 3, No. 11, P. 1–3, in Russian.
    eLIBRARY: 24388357. $ РНФ 14-50-00150. i
  196. [РИНЦ] A.V. Seliverstov, V.A. Lyubetsky. A novel algorithm to solve the combinatorial set partitioning problem. Information processes, 2015, Vol. 15, No. 3, P. 337–342, in Russian.
    eLIBRARY: 24928367. $ RSF 14-50-00150
  197. [РИНЦ+ВАК] No English citation is currently avaliable for this publication.
    В.А. Любецкий, А.В. Селиверстов. О решении одной NP-полной задачи. Современные информационные технологии и ИТ-образование, 2015, том 2, № 11, стр. 569–570.
    eLIBRARY26167547. $ РНФ 14-50-00150.
  198. Abstracts

  199. V.A. Lyubetsky, L.I. Rubanov, O.A. Zverkov, L.Yu. Rusin, A.V. Seliverstov, A.G. Zaraisky. A method of detecting local gene synteny rearrangement. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’15, Moscow, Russia, July 16–19 2015, Moscow, IITP RAS, 2015, P. 249–252.
    eLIBRARY: 23913986, i. $ RFBR 13-04-40196-Н.
  200. S.A. Korolev, S.A. Lyzhin, O.A. Zverkov, A.V. Seliverstov, V.A. Lyubetsky. A Search for Genes Encoding Histidine-Containing Leader Peptides in Actinobacteria. Proceedings of the 39th IITP RAS Interdisciplinary Conference & School “Information Technology and Systems 2015” (ITaS’15), Sochi, Russia, Sep 7–11 2005, Moscow: IITP, 2015, P. 53–60.
    eLIBRARY: 24378300. $ RSF 14-50-00150. i,
  201. R.A. Gershgorin, K.Yu. Gorbunov, A.V. Seliverstov, V.A. Lyubetsky. Evolution of Chromosome Structures. Proceedings of the 39th IITP RAS Interdisciplinary Conference & School “Information Technology and Systems 2015” (ITaS’15), Sochi, Russia, Sep 7–11 2005, Moscow: IITP, 2015, P. 105–120.
    eLIBRARY: 24378278. $ RSF 14-50-00150. i,
  202. V.A. Lyubetsky, L.I. Rubanov, A.V. Bairamov, I.V. Shandarin, A.S. Ivanova, L.Yu. Rusin, O.A. Zverkov, A.V. Seliverstov, A.G. Zaraisky. A Large-scale Search for Gene Losses, Gains and Syntenic Rearrangements in Vertebrate Animals. Materials of the VIII Moscow International Congress “Biotechnology: State of the Art and Prospects of Development”, Moscow, Russia, March 17–20 2015, Part 1, P. 260–261.
    $ RFBR 13-04-40196-Н.
  203. V.G. Kanovei. Some applications of finite-support products of Jensen’s minimal forcing. Book of abstracts, Logic Colloquium 2015, Annual European Summer Meeting of the Association for Symbolic Logic, University of Helsinki, Aug 3–8 2015, P. 670–671,
  204. A.V. Seliverstov. Cubic hypersurfaces with an odd number of singular points. International Conference Polynomial Computer Algebra '2015, St. Petersburg, April 13–18 2015, Euler International Mathematical Institute, Ed. by N.N. Vassiliev, VVM Publishing, 2015, P. 85–86,
  205. A.V. Seliverstov. Note on complex cubic forms with vanishing hessian. All-Russian Conference with International Participation “Control Theory and Mathematical Modeling,” dedicated to the memory of professor N.V. Azbelev and professor E.L. Tonkov, Izhevsk, Russia, June 08–12, 2015), Izhevsk: Udmurt State University, 2015, P. 333–334, in Russian.
    eLIBRARY: 23708884. $ РНФ 14-50-00150
  206. No English citation is currently avaliable for this publication.
    А.В. Селиверстов. Замечание о билатеральной симметрии. Труды XIII международных Колмогоровских чтений: сборник статей, Ярославль, 19–22 мая 2015, Ярославль: РИО ЯГПУ, 2015, стр. 90–92.
    $ РНФ 14-50-00150.
  207. No English citation is currently avaliable for this publication.
    А.В. Селиверстов. О вычислительной сложности поиска особых точек. Дискретная математика, алгебра и их приложения: Тезисы докладов Международной научной конференции, Минск, 14–18 сентября 2015, Минск: Институт математики НАН Беларуси, 2015, стр. 135–137,
  208. No English citation is currently avaliable for this publication.
    А.В. Селиверстов. Об инцидентности вершин куба и подпространств коразмерности два. Тезисы 58-ой научной конференция МФТИ, 23–28 ноября 2015.
    $ РНФ 14-50-00150. i,
  209. No English citation is currently avaliable for this publication.
    Р.А. Гершгорин. Гиперграфы в биоинформатике. Тезисы 58-ой научной конференция МФТИ, 23–28 ноября 2015.
    $ РНФ 14-50-00150. i,
  210. Preprints

  211. V.G. Kanovei, K.U. Katz, M.G. Katz, D. Sherry. Euler's lute and Edwards' oud. Eprint, arXiv:1506.02586 [math.HO], 8 Jun / 10 Nov 2015, i,
  212. Other

  213. No English citation is currently avaliable for this publication.
    А.Г. Зарайский, А.А. Пантелеев, В.А. Любецкий. Новые подходы к изучению механизмов развития мозга и регенерации: роль генов, исчезнувших в процессе эволюции. Отчётная конференция РФФИ «Комплексные междисциплинарные фундаментальные исследования» (КОМФИ) в области молекулярной и клеточной организации биологических структур и процессов, 12–13 октября 2015, Пленарный доклад
  214. 2014

    Books

  215. A. Troitsky, L. Rusin, N. Petrov, (Eds.). Molecular Phylogenetics. Contributions to the 4nd Moscow International Conference “Molecular Phylogenetics” (Moscow, Russia, September 23–26, 2014), Moscow: Torus Press, 2014, 90 p.: ill., ISBN: 978-5-94588-153-2, eLIBRARY: 25432779
  216. Articles

  217. [Q2 2.6 WoS] L.Yu. Rusin, E.V. Lyubetskaya, K.Yu. Gorbunov, V.A. Lyubetsky. Reconciliation of Gene and Species Trees. BioMed Research International, Mar 27 2014, Vol. 2014, Article ID 642089, 22 pp., DOI: 10.1155/2014/642089, WOS000333909600001, Scopus: 2-s2.0-84899516778, PMID24800245, eLIBRARY: 21873983. $ MESRF 8481 & 14.740.11.1053, RFBR 13-04-40196-H.
  218. V.A. Lyubetsky, K.Yu. Gorbunov. Chromosome structures reconstruction. In: Molecular Phylogenetics, (Eds.: A. Troitsky, L. Rusin, N. Petrov), Moscow: Torus Press, 2014, P. 42, eLIBRARY: 25432819,
  219. [Q2 2.6 WoS] V.A. Lyubetsky, W.H. Piel, D. Quandt. Current Advances in Molecular Phylogenetics. BioMed Research International, Apr 7 2014, Vol. 2014, Article ID 596746, DOI: 10.1155/2014/596746, WOS000334844300001, Scopus: 2-s2.0-84900023503, PMID24809056, eLIBRARY: 21877383,
  220. [Q3 1.4 WoS] V.A. Lyubetsky, S.A. Korolev, A.V. Seliverstov, O.A. Zverkov, L.I. Rubanov. Gene expression regulation of the PF00480 or PF14340 domain proteins suggests their involvement in sulfur metabolism. Computational Biology and Chemistry, Apr 2014, Vol. 49, P. 7–13, DOI: 10.1016/j.compbiolchem.2014.01.001, WOS000335289200002, Scopus: 2-s2.0-84893856987, PMID24513779, eLIBRARY: 21864797. $ MESRF 8481 & 14.740.11.1053, RFBR 13-04-40196-Н. i,
  221. [Q1 8.2 WoS] S.A. Karpov, A.A. Kobseva, M.A. Mamkaeva, K.A. Mamkaeva, K.V. Mikhailov, G.S. Mirzaeva, V.V. Aleoshin. Gromochytrium mamkaevae gen. & sp. nov. and two new orders: Gromochytriales and Mesochytriales (Chytridiomycetes). Persoonia, Jun 2014, Vol. 32, P. 115–126, DOI: 10.3767/003158514X680234, WOS000339054000007, PMID25264386, eLIBRARY: 24061130,
  222. [Q1 4.0 WoS] S.A. Karpov, M.A. Mamkaeva, V.V. Aleoshin, E. Nassonova, O. Lilje, F.H. Gleason. Morphology, phylogeny, and ecology of the aphelids (Aphelidea, Opisthokonta) and proposal for the new superphylum Opisthosporidia. Frontiers in Microbiology, Mar 28 2014, Vol. 5, Article 112, 11 pp., DOI: 10.3389/fmicb.2014.00112, WOS000333518900002, PMID24734027, eLIBRARY: 21871641,
  223. [Q1 3.9 WoS] K.V. Mikhailov, J. Janouskovec, D.V. Tikhonenkov, G.S. Mirzaeva, A.Yu. Diakin, T.G. Simdyanov, A.P. Mylnikov, P.J. Keeling, V.V. Aleoshin. A Complex Distribution of Elongation Family GTPases EF1A and EFL in Basal Alveolate Lineages. Genome Biology and Evolution, Sep 2014, Vol. 6, No. 9, P. 2361–2367, DOI: 10.1093/gbe/evu186, WOS000343249300015, PMID25179686, eLIBRARY: 24946508, ISTINA: 6922225,
  224. [Q1 2.8 WoS] D.V. Tikhonenkov, J. Janouskovec, A.P. Mylnikov, K.V. Mikhailov, T.G. Simdyanov, V.V. Aleoshin, P.J. Keeling. Description of Colponema vietnamica sp.n. and Acavomonas peruviana n. gen. n. sp., two new alveolate phyla (Colponemidia nom. nov. and Acavomonidia nom. nov.) and their contributions to reconstructing the ancestral state of alveolates and eukaryotes. PLoS ONE, Apr 16 2014, Vol. 9, No. 4, e95467, 16 pp., DOI: 10.1371/journal.pone.0095467, WOS000336863900146, PMID24740116, eLIBRARY: 21874675,
  225. [Q2 2.6 WoS] E.I. Koshel, V.V. Aleshin, G.A. Eroshenko, V.V. Kutyrev. Phylogenetic analysis of entomoparasitic nematodes, potential control agents of flea populations in natural foci of plague. BioMed Research International, 2014, Vol. 2014, Article ID 135218, 26 pp., DOI: 10.1155/2014/135218, WOS000334190900001, PMID24804197, eLIBRARY: 21874152,
  226. [РИНЦ+ВАК] No English citation is currently avaliable for this publication.
    О.А. Зверков, Л.И. Рубанов, А.В. Селиверстов. Поиск ультраконсервативных элементов у простейших типа Apicomplexa. Современные информационные технологии и ИТ-образование, 2014, № 10, стр. 865–870, eLIBRARY23020710,
  227. V.V. Aleoshin, K.V. Mikhailov, S.A. Karpov. The origin of fungi and microsporidians. In: Molecular Phylogenetics, (Eds.: A. Troitsky, L. Rusin, N. Petrov), Moscow: Torus Press, 2014, P. 4, eLIBRARY: 25432785
  228. V. Ivanenko, M.A. Nikitin, K.V. Mikhailov, S. Moudrova, E.V. Romanova, G. Abizova, V.V. Aleoshin. Molecular phylogeny of Copepoda (Crustacea) with emphasis on symbiotic taxa. In: Molecular Phylogenetics, (Eds.: A. Troitsky, L. Rusin, N. Petrov), Moscow: Torus Press, 2014, P. 22, eLIBRARY: 25432801
  229. N.B. Petrov, I.P. Vladychenskaya, V.V. Aleoshin, O.G. Manylov. Neodasys (Gastrotricha) belongs to Macrodasyida not Chaetonotida: evidence from 18 and 28S rRNA gene sequences. In: Molecular Phylogenetics, (Eds.: A. Troitsky, L. Rusin, N. Petrov), Moscow: Torus Press, 2014, P. 57, eLIBRARY: 25432833
  230. E.V. Romanova, V.V. Aleoshin, K.V. Mikhailov, M.D. Logacheva, R.M. Kamaltynov, D.Yu. Sherbakov. Structural and phylogenetic analysis of mitochondrial genomes of amphipods from lake Baikal. In: Molecular Phylogenetics, (Eds.: A. Troitsky, L. Rusin, N. Petrov), Moscow: Torus Press, 2014, P. 60, eLIBRARY: 25432836
  231. [Scopus] A.V. Seliverstov. Polytopes and Connected Subgraphs. Discrete Anal. Oper. Res., 2014, Vol. 21, No. 3, P. 82–86, in Russian
  232. [РИНЦ] No English citation is currently avaliable for this publication.
    Р.А. Гершгорин, Л.И. Рубанов, А.В. Селиверстов. Легко вычислимые инварианты для распознавания гиперповерхности. Информационные процессы, 2014, том 14, № 4, стр. 365–369, eLIBRARY22800361. $ РНФ 14-50-00150. i,
  233. [Q4 .4 WoS] L.I. Rubanov. Parallelization of Nonuniform Loops in Supercomputers with Distributed Memory. Journal of Communications Technology and Electronics, Jun 2014, Vol. 59, No. 6, P. 639–646, DOI: 10.1134/S1064226914060175, WOS000338998100017. $ MESRF 8481.
  234. [РИНЦ] L.I. Rubanov. Parallel Monte Carlo Modeling on Distributed Memory Systems. International Journal of Open Information Technologies, 2014, Vol. 2, No. 2, P. 12–20, in Russian. $ MESRF 8481
  235. [Scopus] T. Bascelli, E. Bottazzi, F.S. Herzberg, V.G. Kanovei, K.U. Katz, M.G. Katz, T. Nowik, D. Sherry, S. Shnider. Fermat, Leibniz, Euler, and the Gang: The True History of the Concepts of Limit and Shadow. Notices of the American Mathematical Society, Sep 2014, Vol. 61, No. 8, P. 848–864, DOI: 10.1090/noti1149, eLIBRARY: 24048032. $ RFBR 13-01-00006.
  236. V.G. Kanovei. On the automorphisms behind the Gitik – Koepke model. In: Infinity, Computability and Metamathematics, Festschrift celebrating the 60th birthdays of Peter Koepke and Philip Welch, Stefan Geschke, Benedikt Loewe, and Philipp Schlicht, eds, 17 April 2014, College publications, London, 2014, Vol. 23, P. 229–253, i
  237. [РИНЦ+ВАК] No English citation is currently avaliable for this publication.
    И.В. Латкин, А.В. Селиверстов. О сложности фрагментов теории поля комплексных чисел. Современные информационные технологии и ИТ-образование, 2014, № 10, стр. 849–855, eLIBRARY23020708,
  238. Dissertations

  239. No English citation is currently avaliable for this publication.
    О.А. Зверков. Функции и эволюция РНК-полимераз в митохондриях и пластидах. Автореферат диссертации на соискание учёной степени кандидата физико-математических наук (03.01.09 – Математическая биология, биоинформатика), Москва, 2014, 26 стр., eLIBRARY30404972,
  240. No English citation is currently avaliable for this publication.
    О.А. Зверков. Функции и эволюция РНК-полимераз в митохондриях и пластидах. Диссертация на соискание учёной степени кандидата физико-математических наук (03.01.09 – Математическая биология, биоинформатика), Москва, 2014, 112 стр.,
  241. Abstracts

  242. O.A. Zverkov, A.V. Seliverstov, V.A. Lyubetsky. A Database of Rhodophyte Plastid Protein Families and Regulation of moeB Genes. Abstracts of the Ninth International Conference on Bioinformatics of Genome Regulation and Structure\Systems Biology (BGRS\SB'2014), Novosibirsk, Russia, June 23–28 2014, P. 176. $ RFBR 13-04-40196-Н.
  243. No English citation is currently avaliable for this publication.
    А.В. Селиверстов. О вершинах куба, лежащих на гиперплоскости. Труды XII международных Колмогоровских чтений: сборник статей, Ярославль, ЯГПУ, 2014, стр. 113–116,
  244. No English citation is currently avaliable for this publication.
    Р.А. Гершгорин, И.В. Латкин, А.В. Селиверстов. Следы форм высших степеней. Труды 57-й научной конференции МФТИ, Москва–Долгопрудный–Жуковский, 24–29 ноября 2014, Управление и прикладная математика, том 1, М.: МФТИ, 2014, стр. 11–12,
  245. Preprints

  246. V.G. Kanovei. A generalization of Solovay's Σ-construction. Eprint, arXiv:1402.0961 [math.LO], 5 Feb 2014, i,
  247. V.G. Kanovei. A generalization of Solovay's Σ-construction with application to intermediate models. Eprint, arXiv:1403.5757 [math.LO], 23 Mar 2014, i,
  248. T. Bascelli, E. Bottazzi, F.S. Herzberg, V.G. Kanovei, K.U. Katz, M.G. Katz, T. Nowik, D. Sherry, S. Shnider. Fermat, Leibniz, Euler, and the gang: The true history of the concepts of limit and shadow. Eprint, arXiv:1407.0233 [math.HO], 1 Jul 2014, 35 pp., i,
  249. V.G. Kanovei. A generalization of Solovay's Σ-construction with application to intermediate models. Eprint, arXiv:1407.0929 [math.LO], 3/4 Jul 2014, 12 pp., i,
  250. V.G. Kanovei, V.A. Lyubetsky. Linearization of partial quasi-orderings in the Solovay model revisited. Eprint, arXiv:1408.1202 [math.LO], 6 Aug 2014, i,
  251. V.G. Kanovei, V.A. Lyubetsky. A countable definable set of reals containing no definable elements. Eprint, arXiv:1408.3901v1 [math.LO], 18 Aug 2014, i,
  252. V.G. Kanovei, V.A. Lyubetsky. A definable E0-class containing no definable elements. Eprint, arXiv:1408.6642 [math.LO], 28 Aug 2014, i,
  253. V.G. Kanovei, V.A. Lyubetsky. Counterexamples to countable-section Π21 uniformization and Π31 separation. Eprint, arXiv:1410.2537 [math.LO], 9/16 Oct 2014, i,
  254. V.G. Kanovei, V.A. Lyubetsky. On countable cofinality and decomposition of definable thin orderings. Eprint, arXiv:1412.0195 [math.LO], 30 Nov 2014, i,
  255. Other

  256. V.A. Lyubetsky, A.V. Seliverstov, K.Yu. Gorbunov. Rearrangement of chromosomes: problems, algorithms, databases, and gene expression regulations. The Ninth International Conference on Bioinformatics of Genome Regulation and Structure\Systems Biology (BGRS\SB'2014), Novosibirsk, Russia, 24 Jun 2014, oral presentation
  257. No English citation is currently avaliable for this publication.
    В.А. Любецкий, К.Ю. Горбунов. Алгоритм расстановки по дереву предковых хромосомных структур: корректность и результаты. IX Международная научно-практическая конференция «Современные информационные технологии и ИТ-образование», Москва, МГУ им. М. В. Ломоносова, 15 ноября 2014, доклад, i,
  258. No English citation is currently avaliable for this publication.
    К.Ю. Горбунов. Алгоритм перестройки хромосомной структуры. IX Международная научно-практическая конференция «Современные информационные технологии и ИТ-образование», Москва, МГУ им. М. В. Ломоносова, 15 ноября 2014, доклад, i,
  259. No English citation is currently avaliable for this publication.
    В.А. Любецкий. Эффективный параллельный алгоритм поиска плотных подграфов. IX Международная научно-практическая конференция «Современные информационные технологии и ИТ-образование», Москва, МГУ им. М. В. Ломоносова, 14 ноября 2014, пленарный доклад, i,
  260. No English citation is currently avaliable for this publication.
    Л.И. Рубанов, А.В. Селиверстов, В.А. Любецкий. Метод выделения кластеров во взвешенном графе. IX Международная научно-практическая конференция «Современные информационные технологии и ИТ-образование», Москва, МГУ им. М. В. Ломоносова, 15 ноября 2014, доклад
  261. No English citation is currently avaliable for this publication.
    К.Ю. Горбунов, В.А. Любецкий. Линейный алгоритм кратчайшей перестройки структур. Семинар по теории кодирования, Москва, Большой Каретный пер., дом 19, комн. 307, 16 декабря 2014, 19:00, доклад, MathNet
  262. 2013

    Books

  263. V.G. Kanovei, V.A. Lyubetsky. Modern set theory: absolute undecidability of classical problems. Moscow, MCNMO press, 2013, 380 p., monograph, in Russian
  264. V. Kanovei, M. Sabok, J. Zapletal. Canonical Ramsey Theory on Polish Spaces. Cambridge Tracts in Mathematics, Iss. 202, Cambridge University Press, 2013, viii+269 pp., ISBN 978-1-107-02685-8, 978-1-139-20866-6, DOI: 10.1017/CBO9781139208666, WOS000325694000012
  265. U. Felgner, V. Kanovei, P. Koepke, W. Purkert, editors. Felix Hausdorff, Gesammelte Werke, Band Ia: Allgemeine Mengenlehre. Berlin: Springer, 2013, xxvi+538 pp., ISBN 978-3-642-25598-4
  266. Articles

  267. [РИНЦ+ВАК] O.A. Zverkov, A.V. Seliverstov, V.A. Lyubetsky. Averaged entropy as conservativity measure of genome regions. Tambov University Reports. Series: Natural and Technical Sciences, 2013, Vol. 18, Iss. 5, part 2, P. 2529–2531, in Russian
  268. [РИНЦ] S.A. Korolev, V.A. Lyubetsky, A.V. Seliverstov. A model of ancestral genome evolution and speciation. Information Processes, 2013, Vol. 13, No. 4, P. 336–337, in Russian, eLIBRARY: 21016906
  269. [РИНЦ+ВАК] No English citation is currently avaliable for this publication.
    О.А. Зверков. Использование быстрых алгоритмов в задаче кластеризации последовательностей. Современные информационные технологии и ИТ-образование, 2013, № 9, стр. 757–763, eLIBRARY23020601,
  270. [РИНЦ+ВАК] No English citation is currently avaliable for this publication.
    В.А. Любецкий, К.Ю. Горбунов. Задачи и алгоритмы, связанные с хромосомными перестройками. Современные информационные технологии и ИТ-образование, 2013, № 9, стр. 764–768, eLIBRARY23020602,
  271. [Q2 2.6 WoS] V.A. Lyubetsky, A.V. Seliverstov, O.A. Zverkov. Transcription regulation of plastid genes involved in sulfate transport in Viridiplantae. BioMed Research International, 2013, Vol. 2013, Article ID 413450, DOI: 10.1155/2013/413450, WOS000324210600001, Scopus: 2-s2.0-84884259506, PMID24073405, eLIBRARY: 20455937, i,
  272. [Scopus] O.A. Zverkov, L.Yu. Rusin, A.V. Seliverstov, V.A. Lyubetsky. Study of Direct Repeats in Micro Evolution of Plant Mitochondria and Plastids Based on Protein Clustering. Moscow University Biological Sciences Bulletin, 2013, Vol. 68, No. 2, P. 58–62, DOI: 10.3103/S0096392513020119, Scopus: 2-s2.0-84879161517, eLIBRARY: 20440011, i,
  273. [Scopus] V.A. Lyubetsky, A.V. Seliverstov, O.A. Zverkov. Elaboration of the Homologous Plastid-Encoded Protein Families that Separate Paralogs in Magnoliophytes. Mathematical Biology and Bioinformatics, 2013, Vol. 8, No. 1, P. 225–233, in Russian, Scopus: 2-s2.0-84884259236, Mi: mbb141, i
  274. [Q1 9.3 WoS] J. Janouskovec, D.V. Tikhonenkov, K.V. Mikhailov, T.G. Simdyanov, V.V. Aleoshin, A.P. Mylnikov, P.J. Keeling. Colponemids represent multiple ancient alveolate lineages. Current Biology, Dec 16 2013, Vol. 23, Iss. 24, P. 2546–2552, DOI: 10.1016/j.cub.2013.10.062, PMID24316202, eLIBRARY: 21901567,
  275. [Q2 2.7 WoS] S.A. Karpov, K.V. Mikhailov, G.S. Mirzaeva, I.M. Mirabdullaev, K.A. Mamkaeva, N.N. Titova, V.V. Aleoshin. Obligately Phagotrophic Aphelids Turned out to Branch with the Earliest-diverging Fungi. Protist, Mar 2013, Vol. 164, Iss. 2, P. 195–205, DOI: 10.1016/j.protis.2012.08.001, WOS000315280900005, PMID23058793, eLIBRARY: 20433544,
  276. [Q3 1.9 WoS] M.A. Nikitin, V.V. Aleoshin. Effects of taxon sampling in reconstructions of intron evolution. International Journal of Genomics, 2013, Vol. 2013, Article ID 671316, 11 pp., DOI: 10.1155/2013/671316, PMID23671844, eLIBRARY: 20441173, i,
  277. [Q4 1.0 WoS] E.A. Lysenko, A.A. Klaus, V.V. Kuznetsov. Analysis of intron-containing pre-mRNA and spliced mRNA in maize chloroplasts by RT-PCR. Molecular Biology, Jan 2013, Vol. 47, Iss. 1, P. 112–119, DOI: 10.1134/S002689331301007X, WOS000315335300010,
  278. [Q4 .8 WoS] A.A. Klaus, E.A. Lysenko, V.P. Kholodova. Maize plant growth and accumulation of photosynthetic pigments at short- and long-term exposure to cadmium. Russian Journal of Plant Physiology, Mar 2013, Vol. 60, Iss. 2, P. 250–259, DOI: 10.1134/S1021443713020118, WOS000315094700011,
  279. [РИНЦ+ВАК] No English citation is currently avaliable for this publication.
    В.В. Алёшин. Филогения беспозвоночных в свете молекулярных данных: перспективы завершения филогенетики как науки. Труды Зоологического института РАН, том 317, № Приложение 2, 2013, стр. 9–38, eLIBRARY23150297, i,
  280. [РИНЦ+ВАК] No English citation is currently avaliable for this publication.
    А.А. Белостоцкий. Биологические базы знаний и их применения. Современные информационные технологии и ИТ-образование, 2013, № 9, стр. 745–746,
  281. [Q3 .5 WoS] V.G. Kanovei, V.A. Lyubetsky. On effective σ-boundedness and σ-compactness. Mathematical Logic Quarterly, May 2013, Vol. 59, Iss. 3, P. 147–166, DOI: 10.1002/malq.201200001, WOS000318790100005, Scopus: 2-s2.0-84877641044, eLIBRARY: 20427977,
  282. [РИНЦ+ВАК] A.V. Seliverstov. On connected subgraph cone. Tambov University Reports. Series: Natural and Technical Sciences, 2013, Vol. 18, Iss. 5, part 2, P. 2668–2670, in Russian, eLIBRARY: 20200902
  283. [Scopus] A.V. Seliverstov. Monomials in quadratic forms. Journal of Applied and Industrial Mathematics, 2013, Vol. 7, Iss. 3, P. 431–434, DOI: 10.1134/S1990478913030162, Scopus: 2-s2.0-84883338627, eLIBRARY: 20455609,
  284. [Q2 .7 WoS] V.G. Kanovei, M.G. Katz, T. Mormann. Tools, Objects, and Chimeras: Connes on the Role of Hyperreals in Mathematics. Foundations of Science, Jun 2013, Vol. 18, Iss. 2, P. 259–296, DOI: 10.1007/s10699-012-9316-5, WOS000319436600003, eLIBRARY: 20436177,
  285. V.G. Kanovei, P. Koepke. Gaps in partially ordered sets and related problems. Commentary to [H 1909a] and [H 1936b], In: Felix Hausdorff, Gesammelte Werke, Band Ia: Allgemeine Mengenlehre, Berlin: Springer, 2013, P. 367–405, ISBN 978-3-642-25598-4,
  286. V.G. Kanovei. Kommentar zu [H 1909a], Die Graduierung nach dem Endverlauf. In: Felix Hausdorff, Gesammelte Werke, Band Ia: Allgemeine Mengenlehre, Berlin: Springer, 2013, P. 336–346, ISBN 978-3-642-25598-4,
  287. V.G. Kanovei. Kommentar zu [H 1936b], Summen von $aleph_1$ Mengen. In: Felix Hausdorff, Gesammelte Werke, Band Ia: Allgemeine Mengenlehre, Berlin: Springer, 2013, P. 364–366, ISBN 978-3-642-25598-4,
  288. [Scopus] J. Bair, P. Blaszczyk, R. Ely, V. Henry, V.G. Kanovei, K.U. Katz, M.G. Katz, S.S. Kutateladze, T. McGaffey, D.M. Schaps, D. Sherry, S. Shnider. Is mathematical history written by the victors?. Notices of the American Mathematical Society, Aug 2013, Vol. 60, No. 7, P. 886–904, eLIBRARY: 20439744, i,
  289. [РИНЦ+ВАК] No English citation is currently avaliable for this publication.
    А.В. Селиверстов. Алгоритм проверки совместимости системы двух уравнений. Современные информационные технологии и ИТ-образование, 2013, № 9, стр. 773–774, eLIBRARY23020604,
  290. Abstracts

  291. V.A. Lyubetsky, K.Yu. Gorbunov, L.Yu. Rusin. Detecting conflicts in large sets of phylogenetic trees. Proceedings of the “BioSyst.EU 2013 Global systematics” conference, Vienna, Austria, February 18–22 2013, P. 131,
  292. V.A. Lyubetsky, A.V. Seliverstov, O.A. Zverkov. Protein Families in Plastomes of Plants and Green Algae. Proceedings of the VII Moscow International Congress “Biotechnology: State of the Art and Prospects of Development”, Moscow, Russia, March 19-22, 2013, Moscow: JSC “Expo-biochem-technologies”, D.I. Mendeleyev University of Chemistry and Technology of Russia, 2013, P. 243,
  293. No English citation is currently avaliable for this publication.
    О.А. Зверков, А.В. Селиверстов, В.А. Любецкий. Построение разделяющих паралоги семейств гомологичных белков, кодируемых в пластидах цветковых растений. Труды 37-й конференции «Информационные технологии и системы» (ИТиС’13), Калининград, Россия, 1–6 сентября 2013, стр. 172–177,
  294. N.V. Kobets, D.B. Goncharov, A.V. Seliverstov, O.A. Zverkov, V.A. Lyubetsky. Comparative analysis of apicoplast-targeted proteins in Toxoplasma gondii and other Apicomplexa species. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’13, Moscow, Russia, July 25–28 2013, i,
  295. V.A. Lyubetsky, S.A. Korolev, A.V. Seliverstov, O.A. Zverkov. Rho-dependent attenuation of sulfur metabolism in mycobacteria. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’13, Moscow, Russia, July 25–28 2013, i,
  296. A.A. Belostotsky. RNA polymerase II may interact with different transcription factors during elongation according to out-of-peak ChIP-seq signal analysis. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’13, Moscow, Russia, July 25–28 2013, i
  297. A.A. Belostotsky. Integration of protein-protein and protein-DNA interaction. Approach for protein complexes-on-DNA database. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’13, Moscow, Russia, July 25–28 2013, i
  298. A.A. Belostotsky. Protein-protein and protein-DNA interaction are not obviously positively correlated. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’13, Moscow, Russia, July 25–28 2013, i
  299. A.A. Belostotsky. Integration of protein-protein and protein-DNA interaction. Approach for protein complexes-on-DNA database. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’13, Moscow, Russia, July 25–28 2013, i
  300. A.A. Belostotsky. Hypothesis of biological networks as a system of linked oscillators. Very briefly. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’13, Moscow, Russia, July 25–28 2013, i
  301. No English citation is currently avaliable for this publication.
    С.А. Королев, В.А. Любецкий. Модель формирования устойчивых геномов в среде генов. Труды 56-й научной конференции МФТИ, Москва–Долгопрудный–Жуковский, 25–30 ноября 2013, М.: МФТИ, 2013, Управление и прикладная математика, том 1, стр. 86–87,
  302. A. Karlyshev, V. Melnikov, V. Khlebnikov, I. Kosarev, V. Sakulin, N. Kulikova, R. Vasilenko, V. Uversky, V. Lyubetsky, A. Netrusov, G. Sukhikh, V. Abramov. Genome sequence of Lactobacillus gasseri 2016: comparative genome analysis, unique genes, responsible for the probiotic properties. International Conference “High-Throughput Sequencing in Genomics”, Novosibirsk, Russia, July 21–25 2013, P. 58, eLIBRARY: 32756349,
  303. A.V. Seliverstov. Integral vectors orthogonal to a large set of bounded weight (0, 1)-vectors. Polynomial Computer Algebra '2013, Euler International Mathematical Institute, St. Petersburg, May 6–10 2013,
  304. No English citation is currently avaliable for this publication.
    А.В. Селиверстов. О релаксационном многограннике для квадратичного булева программирования. Материалы международной конференции «Дискретная оптимизация и исследование операций», Новосибирск, 24-28 июня 2013, Новосибирск: издательство Института математики, 2013, стр. 152,
  305. No English citation is currently avaliable for this publication.
    А.В. Селиверстов. О перечислении особых точек на аффинной гиперповерхности. Математика в современном мире. Материалы Международной конференции, посвященной 150-летию Д.А. Граве, Вологда: ВГПУ, 2013, стр. 35, eLIBRARY24596237,
  306. V.G. Kanovei. Nonstandard analysis on surreal numbers. Proceedings of the international conference NUMTA 2013, Pellegrini Editore, Kosenza, Italy, 2013, P. 83
  307. V.G. Kanovei. Surreal numbers from the point of view of nonstandard analysis. Sy David Friedman's 60th-Birthday Conference, Vienna, Austria, July 2013
  308. No English citation is currently avaliable for this publication.
    А.В. Селиверстов. Несовместность системы двух уравнений. Труды 56-й научной конференции МФТИ, Москва–Долгопрудный–Жуковский, 25–30 ноября 2013, М.: МФТИ, 2013, Управление и прикладная математика, том 1, стр. 29–30, i,
  309. Preprints

  310. J. Bair, P. Blaszczyk, R. Ely, V. Henry, V.G. Kanovei, K.U. Katz, M.G. Katz, S.S. Kutateladze, T. McGaffey, D.M. Schaps, D. Sherry, S. Shnider. Is mathematical history written by the victors?. Eprint, arXiv:1306.5973 [math.HO], 25 Jun 2013, 41 pp., i,
  311. V.G. Kanovei. On countable cofinality of definable chains in Borel partial orders. Eprint, arXiv:1312.2064 [math.LO], 7 Dec 2013, i,
  312. Other

  313. No English citation is currently avaliable for this publication.
    В.А. Любецкий. Модели и алгоритмы в биоинформатике. VIII Международная научно-практическая конференция «Современные информационные технологии и ИТ-образование», Москва, МГУ им. М. В. Ломоносова, 8 ноября 2013, пленарный доклад
  314. 2012

    Books

  315. A.V. Troitsky, L.Yu. Rusin, V.V. Aleoshin, (Eds.). Molecular Phylogenetics. Contributions to the 3rd Moscow International Conference “Molecular Phylogenetics” (Moscow, Russia, July 31 – August 4, 2012), Moscow: Torus Press, 2012, 172 p.: ill., ISBN: 978-5-94588-118-1, eLIBRARY: 25260537
  316. Articles

  317. [РИНЦ+ВАК] V.A. Lyubetsky. Computer modeling in problems of gene regulation and species evolution. RANS, 2012, Vol. 4, P. 108–115, in Russian
  318. [РИНЦ+ВАК] No English citation is currently avaliable for this publication.
    В.А. Любецкий. Компьютерное моделирование в задачах регуляции работы генов и эволюции организмов. Современные информационные технологии и ИТ-образование, 2012, № 8, стр. 586–595, eLIBRARY23020438,
  319. [Q4 1.0 WoS] K.Yu. Gorbunov, V.A. Lyubetsky. Fast Algorithm to Reconstruct a Species Supertree from a Set of Protein Trees. Molecular Biology, Feb 2012, Vol. 46, No. 1, P. 161–167, DOI: 10.1134/S0026893312010086, WOS000302960100020, Scopus: 2-s2.0-84857212763, eLIBRARY: 17976882,
  320. [Q4 1.0 WoS] O.A. Zverkov, A.V. Seliverstov, V.A. Lyubetsky. Plastid-encoded protein families specific for narrow taxonomic groups of algae and protozoa. Molecular Biology, 2012, Vol. 46, No. 5, P. 717–726, DOI: 10.1134/S0026893312050123, WOS000309711200013, Scopus: 2-s2.0-84867292580, eLIBRARY: 20491233,
  321. [Q1 2.6 WoS] V.A. Lyubetsky, O.A. Zverkov, S.A. Pirogov, L.I. Rubanov, A.V. Seliverstov. Modeling RNA polymerase interaction in mitochondria of chordates. Biology Direct, Aug 9 2012, Vol. 7, Article 26, DOI: 10.1186/1745-6150-7-26, WOS000308796200001, Scopus: 2-s2.0-84864643052, PMID22873568, eLIBRARY: 20492347,
  322. [Q1 2.6 WoS] V.A. Lyubetsky, L.I. Rubanov, L.Yu. Rusin, K.Yu. Gorbunov. Cubic time algorithms of amalgamating gene trees and building evolutionary scenarios. Biology Direct, Dec 22 2012, Vol. 7, Article 48, DOI: 10.1186/1745-6150-7-48, WOS000315728400001, Scopus: 2-s2.0-84871384285, PMID23259766, eLIBRARY: 20488413,
  323. [РИНЦ] K.V. Lopatovskaya, O.A. Zverkov, A.V. Seliverstov, V.A. Lyubetsky. Translation Regolation of chlL Gene in Viridiplantae. Information Processes, 2012, Vol. 12, Iss. 3, P. 172–175, in Russian
  324. [РИНЦ] O.A. Zverkov, L.Yu. Rusin, A.V. Seliverstov, V.A. Lyubetsky. Direct Repeat Insertions in Microevolution of Plastids and Mitochondria of Seed Plants. Information Processes, 2012, Vol. 12, Iss. 3, P. 191–197, in Russian
  325. K.V. Mikhailov, G.S. Mirzaeva, K.A. Mamkaeva, S.A. Karpov, V.V. Aleoshin. Amoeboaphelidium protococcarum, a phagotrophic relative of fungi. In: Molecular Phylogenetics, (Eds.: A. Troitsky, L. Rusin, V. Aleoshin), Moscow: Torus Press, 2012, P. 22–23, eLIBRARY: 25261037
  326. O.A. Zverkov, S.A. Korolev, A.V. Seliverstov, V.A. Lyubetsky. Transcription regulation of plastid genes cysT and cysA in Viridiplantae. In: Molecular Phylogenetics, (Eds.: A. Troitsky, L. Rusin, V. Aleoshin), Moscow: Torus Press, 2012, P. 85, eLIBRARY: 25261273,
  327. G.S. Mirzaeva, R.Kh. Allaberdiev, A.Sh. Khamraev, K.V. Mikhailov, V.V. Aleoshin. Molecular genetic studies of termites of genera Anacanthotermes in Central Asia. In: Molecular Phylogenetics, (Eds.: A. Troitsky, L. Rusin, V. Aleoshin), Moscow: Torus Press, 2012, P. 127, eLIBRARY: 25261371
  328. T.G. Simdyanov, A.Yu. Diakin, G.G. Paskerova, V.V. Aleoshin. Phylogenetic position of the archigregarine Selenidium sp. as inferred from molecular phylogeny analysis using 18S, 5.8S, and 28S rDNA sequences. In: Molecular Phylogenetics, (Eds.: A. Troitsky, L. Rusin, V. Aleoshin), Moscow: Torus Press, 2012, P. 130–131, eLIBRARY: 25261380
  329. [Q2 1.4 WoS] E.A. Lysenko, N.L. Pshybytko, N.N. Karavaiko, L.A. Yakovleva, G.V. Novikova, O.N. Kulaeva, V.V. Kusnetsov. Do plant chloroplasts contain histidine kinases?. Acta Physiologiae Plantarum, May 2012, Vol. 34, No. 3, P. 1153–1164, DOI: 10.1007/s11738-011-0912-8, WOS000302811000032,
  330. [Q3 WoS] E.A. Lysenko, A.I. Kulebyakina, P.S. Chelushkin, A.B. Zezin. Diblock Copolymer Micelles with Ionic Amphiphilic Corona. Macromolecular Symposia, Special Issue: Molecular Mobility and Order in Polymer Systems, 2012, Vol. 316, Iss. 1, P. 25–31, DOI: 10.1002/masy.201250604,
  331. [Scopus] A.A. Belostotsky. Analysis of Protein-on-DNA Binding Profiles Determined with ChIP-seq Reveals Possible Interaction of Specific Transcription Factors with RNA Polymerase II during Transcription Elongation. Biophysics, 2012, Vol. 57, No. 2, P. 140–143, DOI: 10.1134/S0006350912020054, i,
  332. [РИНЦ+ВАК] No English citation is currently avaliable for this publication.
    А.В. Белякова, Е.Ю. Эпова, О.А. Гра, М.В. Зылькова, А.Г. Плаксина, М.С. Смирнова, Е.М. Елагина, Н.А. Филимонова, А.Р. Хасанова, А.В. Смирнова, Т.Н. Казеева, А.В. Шибаева, А.Б. Шевелев, В.В. Алешин. Рекомбинантный продуцент соматолиберина курицына основе бацилл. Фундаментальные исследования, 2012, № 5, часть 2, стр. 401–406, i,
  333. [Q3 .6 WoS] V.G. Kanovei, V.A. Lyubetsky. Effective Compactness and Sigma-Compactness. Mathematical notes, May 2012, Vol. 91, Iss. 6, P. 789–799, DOI: 10.1134/S0001434612050252, WOS000305984400025, Scopus: 2-s2.0-84864194710, eLIBRARY: 24952888,
  334. [Q1 2.3 WoS] V.G. Kanovei, V.A. Lyubetsky. An infinity which depends on the axiom of choice. Applied Mathematics and Computation, April 15 2012, Vol. 218, Iss. 16, P. 8196–8202, DOI: 10.1016/j.amc.2011.05.003, WOS000302267700020, Scopus: 2-s2.0-84859431986, eLIBRARY: 23962434,
  335. [Q4 .4 WoS] A.V. Seliverstov, V.A. Lyubetsky. About Forms Equal to Zero at Each Vertex of a Cube. Journal of Communications Technology and Electronics, Aug 2012, Vol. 57, No. 8, P. 892–895, DOI: 10.1134/S1064226912080049, WOS000308549500016, Scopus: 2-s2.0-84867239223, eLIBRARY: 20491108,
  336. [Q4 .4 WoS] K.Yu. Gorbunov, A.V. Seliverstov, V.A. Lyubetsky. Geometric relationship between parallel hyperplanes, quadrics, and vertices of a hypercube. Problems of Information Transmission, Apr 2012, Vol. 48, Iss. 2, P. 185–192, DOI: 10.1134/S0032946012020081, WOS000306338300008, Scopus: 2-s2.0-84865705227, eLIBRARY: 20473311,
  337. [РИНЦ+ВАК] A.V. Seliverstov. Some Notes about Arrangements of Points on Quadrics. Modeling and Analysis of Information Systems, 2012, Vol. 19, No. 4, P. 72–77, in Russian, eLIBRARY: 18229310, Mi: mais248
  338. Abstracts

  339. V.A. Lyubetsky, A.V. Seliverstov. Modeling RNA polymerase interaction in plastids of plants, algea and mitochondria of chordates: human bearing the MELAS mutation and rat with hyposecretion of thyroid hormone. Proceedings of the Eighth International Conference on Bioinformatics of Genome Regulation and Structure\Systems Biology (BGRS\SB'2012), Novosibirsk, Russia, June 25–29 2012, P. 189,
  340. K.Yu. Gorbunov, V.A. Lyubetsky. The problems of reconciling gene and species trees, mapping a gene tree into a species tree, and gene tree inference. Abstracts of the First RECOMB Satellite Conference on Open Problems in Algorithmic Biology (RECOMB-AB), St. Petersburg, Russia, August 27–29 2012, P. 48,
  341. K.Yu. Gorbunov, V.A. Lyubetsky. Modelling co-evolution of regulatory systems, genes and species with supercomputers. Proceedings of The 4th International Conference “Mathematical Biology and Bioinformatics”, Pushchino, Moscow region, October 14–19 2012, P. 70–71,
  342. No English citation is currently avaliable for this publication.
    О.А. Зверков, А.В. Селиверстов, В.А. Любецкий. Семейства белков, кодируемых в пластомах Chlorophyta, Euglenozoa и Rhizaria. Труды 35-й конференции «Информационные технологии и системы» (ИТиС’12), г. Петрозаводск, 19–25 августа 2012, стр. 298–302, i,
  343. No English citation is currently avaliable for this publication.
    А.С. Калинина, А.В. Селиверстов, В.А. Любецкий. Супердеревья пластид хлорофитной ветви водорослей и животных Ecdysozoa. Труды 35-й конференции «Информационные технологии и системы» (ИТиС’12), г. Петрозаводск, 19–25 августа 2012, стр. 307–311, i,
  344. No English citation is currently avaliable for this publication.
    С.А. Королев, В.А. Любецкий. Распределение и роль длинных шпилек. Труды 55-й научной конференции МФТИ, Москва–Долгопрудный–Жуковский, 19–25 ноября 2012, М.: МФТИ, 2012, Управление и прикладная математика, том 1, стр. 94–95,
  345. No English citation is currently avaliable for this publication.
    А.В. Селиверстов. Расположения точек на пустых квадриках. Моделирование и анализ информационных систем, Труды международной конференции, посвящённой 35-летию математического факультета и 25-летию факультета информатики и вычислительной техники Ярославского государственного университета им. П.Г. Демидова, Ярославль. ЯрГУ, 6–7 февраля 2012, стр. 161–163,
  346. No English citation is currently avaliable for this publication.
    А.В. Селиверстов. О нулях в матрицах квадратичных форм. Тезисы докладов международной научной конференции «XI Белорусская математическая конференция», Белоруссия, Минск, 4–9 ноября 2012, часть 4, стр. 99–100,
  347. No English citation is currently avaliable for this publication.
    А.В. Селиверстов. Замечание о фасетах многогранников BQP малой размерности. Труды 55-й научной конференции МФТИ, Москва–Долгопрудный–Жуковский, 19–25 ноября 2012, М.: МФТИ, 2012, Управление и прикладная математика, том 1, стр. 95–96,
  348. Preprints

  349. V.G. Kanovei, M.G. Katz, T. Mormann. Tools, objects, and chimeras: Connes on the role of hyperreals in mathematics. Eprint, arXiv:1211.0244 [math.FA], 1 Nov 2012, 52 pp., i,
  350. 2011

    Articles

  351. [Q1 2.6 WoS] V.A. Lyubetsky, O.A. Zverkov, L.I. Rubanov, A.V. Seliverstov. Modeling RNA polymerase competition: the effect of σ-subunit knockout and heat shock on gene transcription level. Biology Direct, Jan 21 2011, Vol. 6, Article 3, DOI: 10.1186/1745-6150-6-3, WOS000287311800001, Scopus: 2-s2.0-78651579146, PMID21255416, eLIBRARY: 16645698,
  352. [Q4 .4 WoS] K.Yu. Gorbunov, V.A. Lyubetsky. The tree nearest on average to a given set of trees. Problems of Information Transmission, Sep 2011, Vol. 47, No. 3, P. 274–288, DOI: 10.1134/S0032946011030069, WOS000299374700006, Scopus: 2-s2.0-84855917719, eLIBRARY: 18033897,
  353. [Q4 1.0 WoS] K.V. Lopatovskaya, A.V. Seliverstov, V.A. Lyubetsky. NtcA and NtcB regulons in cyanobacteria and rhodophyta chloroplasts. Molecular Biology, 2011, Vol. 45, No. 3, P. 522–526, DOI: 10.1134/S0026893311030083, WOS000291704600019, Scopus: 2-s2.0-79958794077, eLIBRARY: 17003872,
  354. [Q2 3.2 WoS] V.N. Lazarev, S.A. Levitskii, Y.I. Basovskii, M.M. Chukin, T.A. Akopian, V.V. Vereshchagin, E.S. Kostrjukova, G.Y. Kovaleva, M.D. Kazanov, D.B. Malko, A.G. Vitreschak, N.V. Sernova, M.S. Gelfand, I.A. Demina, M.V. Serebryakova, M.A. Galyamina, N.N. Vtyurin, S.I. Rogov, D.G. Alexeev, V.G. Ladygina, V.M. Govorun. Complete Genome and Proteome of Acholeplasma laidlawii. Journal of Bacteriology, Sep 2011, Vol. 193, No. 18, P. 4943–4953, DOI: 10.1128/JB.05059-11, WOS000294261700039, PMID21784942,
  355. [Q1 2.8 WoS] S. Rueckert, T.G. Simdyanov, V.V. Aleoshin, B.S. Leander. Identification of a divergent environmental DNA sequence clade using the phylogeny of gregarine parasites (Apicomplexa) from crustacean hosts. PLoS ONE, Mar 31 2011, Vol. 6, Iss. 3, e18163, DOI: 10.1371/journal.pone.0018163, WOS000289057200037, PMID21483868, eLIBRARY: 16999127,
  356. A.A. Belostotsky. Conception of biological networks at the molecular level as orchestrated systems of oscillators representing interconnected modular molecular clocks. Journal of Metabolomics and Systems Biology, Sep 2011, Vol. 2(2), P. 15–19,
  357. [Scopus] I.V. Kulakovskiy, A.S. Kasianov, A.A. Belostotsky, I.A. Eliseeva, V.J. Makeev. Preferred Distances between Transcription Factor Binding Sites. Biophysics, 2011, Vol. 56, No. 1, P. 114, DOI: 10.1134/S0006350911010155, i,
  358. [Q1 5.5 WoS] I.V. Kulakovskiy, A.A. Belostotsky, A.S. Kasianov, N.G. Esipova, Y.A. Medvedeva, I.A. Eliseeva, V.J. Makeev. A deeper look into transcription regulatory code by preferred pair distance templates for transcription factor binding sites. Bioinformatics, Oct 1 2011, Vol. 27, No. 19, P. 2621–2624, DOI: 10.1093/bioinformatics/btr453, WOS000295412200001,
  359. [Q1 3.7 WoS] E.S. Osipova, E.A. Lysenko, A.V. Troitsky, Yu.I. Dolgikh, Z.B. Shamina, S.A. Gostimskii. Analysis of SCAR Marker Nucleotide Sequences in Maize (Zea mays L.) Somaclones. Plant Science, 2011, Vol. 180, P. 313–322, DOI: 10.1016/j.plantsci.2010.10.004, WOS000286562200019,
  360. [Q2 3.0 WoS] M.L. Kuravsky, V.V. Aleshin, D. Frishman, V.I. Muronetz. Testis-specific glyceraldehyde-3-phosphate dehydrogenase: origin and evolution. BMC Evolutionary Biology, Jun 10 2011, Vol. 11, Article 160, DOI: 10.1186/1471-2148-11-160, WOS000292657300001, PMID21663662, eLIBRARY: 16992373,
  361. [РИНЦ+ВАК] E.Yu. Epova, M.S. Smirnova, A.B. Shevelev, M.Ya. Tremasov, V.V. Aleshin, E.S. Marakasova, A.G. Plaksina, O.V. Osipenkova, M.V. Balovneva, A.V. Shibaeva, K.H. Papunidy, B.V. Tarakanov. Biological Activity of E.coli Strains Expressing Semi-Synthetic Genes of Somatoliberin of Chicken and Pig. Fundamental Research, 2011, No. 3, P. 198–204, in Russian
  362. No English citation is currently avaliable for this publication.
    М.В. Мардашова, В.В. Алешин, М.А. Никитин. Источники и пути формирования фауны морских паразитических нематод. в книге Нематоды естественных и трансформированных экосистем, 2011, Петрозаводск: Карельский научный центр РАН, стр. 76–78, i,
  363. [Q3 .6 WoS] V.G. Kanovei, V.A. Lyubetsky. An effective minimal encoding of uncountable sets. Siberian mathematical journal, Sep 2011, Vol. 52, No. 5, P. 854–863, DOI: 10.1134/S0037446611050107, WOS000298650500010, Scopus: 2-s2.0-80155151863, eLIBRARY: 18011619,
  364. [РИНЦ] A.V. Seliverstov, V.A. Lyubetsky. About Forms Equal to Zero at Each Vertex of a Cube. Information Processes, 2011, Vol. 11, No. 3, P. 330–335, in Russian
  365. Abstracts

  366. K.Yu. Gorbunov, L.I. Rubanov, L.Yu. Rusin, V.A. Lyubetsky. An accurate algorithm of cubic complexity to build supertrees. Zitteliana. An International Journal of Palaeontology and Geobiology. Series B, Vol. 30, Abstracts of the international conference “Deep Metazoan Phylogeny 2011 – new data, new challenges", Munchen, Germany, October 11–14 2011, P. 20, i,
  367. V.A. Lyubetsky, A.V. Seliverstov. Mathematical problems in biological evolution and molecular regulation. Proceedings of the International Mathematical Conference “50 Years Of IITP”, Moscow, Russia, July 25–29 2011, 7 pp., i,
  368. O.A. Zverkov, K.Y. Gorbunov, A.V. Seliverstov, V.A. Lyubetsky. Protein clustering with accounting for domen architecture. Proceedings of the 54th conference of Moscow Institute of Physics and Technology “Basic and applied research in life sciences and engineering in modern information environment”, Moscow, Russia, November 25–26 2011, Section of Management and applied mathematics, Vol. 2, P. 88–89, in Russian
  369. No English citation is currently avaliable for this publication.
    Е.В. Любецкая, К.Ю. Горбунов, А.В. Селиверстов, В.А. Любецкий. Дифференциальные уравнения, описывающие клеточный процесс. Труды 54-й научной конференции МФТИ «Проблемы фундаментальных и прикладных естественных и технических наук в современном информационном обществе», Москва, 25–26 ноября 2011, М.: МФТИ, 2011, Управление и прикладная математика, том 2, стр. 91–92, i,
  370. K.V. Lopatovskaya, A.V. Seliverstov, V.A. Lyubetsky. NtcA- and NtcB-regulons in cyanobacteria and chloroplasts. Proceedings of the VI Moscow International Congress “Biotechnology: State of the Art & Prospect of Development”, Moscow, Russia, March 21–25, 2011, Moscow: JSC “Expo-biochem-technologies”, D.I. Mendeleyev University of Chemistry and Technology of Russia, 2011, Part 2, P. 396,
  371. K.V. Lopatovskaya, A.V. Seliverstov, V.A. Lyubetsky. Bacterial type RNA polymerase sigma subunits and their specific promoters in plastids. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’11, Moscow, Russia, July 21–24 2011, P. 209–210, i,
  372. No English citation is currently avaliable for this publication.
    К.В. Лопатовская, А.В. Селиверстов, В.А. Любецкий. Транскрипция в пластидах кокцидий. Труды 34-й конференции «Информационные технологии и системы» (ИТиС’11), г. Геленджик, 2–7 октября 2011, стр. 20–24, i,
  373. No English citation is currently avaliable for this publication.
    В.А. Любецкий, Л.И. Рубанов, А.В. Селиверстов. Тканеспецифичная транскрипция в митохондриях хордовых в процессе онтогенеза. Юбилейная конференция «50лет ИППИ РАН. Нейрофизиология, биофизика и психофизика в ИППИ РАН: истоки и современность», Москва, Большой Каретный, 19, 15 сентября 2011, стр. 54–58
  374. A.V. Seliverstov, V.A. Lyubetsky. Evolution of RNA-polymerases and their promoters in plastids. 50-years of IITP anniversary conference, Moscow, Russia, September 15 2011, P. 58–62, in Russian
  375. V.G. Kanovei, V.A. Lyubetsky. On the infinitary pantachie of Du Bois Reymond. Proceedings of the International Mathematical Conference “50 Years Of IITP”, Moscow, Russia, July 25–29 2011, 7 pp., i,
  376. No English citation is currently avaliable for this publication.
    А.В. Селиверстов. Об оптимизации на множестве вершин многомерного куба. Труды 54-й научной конференции МФТИ «Проблемы фундаментальных и прикладных естественных и технических наук в современном информационном обществе», Москва, 25–26 ноября 2011, М.: МФТИ, 2011, Управление и прикладная математика, том 2, стр. 74–75, i,
  377. Preprints

  378. V.G. Kanovei. On effective compactness and sigma-compactness. Eprint, arXiv:1103.1060 [math.LO], 5 Mar 2011, i,
  379. V.G. Kanovei. On effective sigma-boundedness and sigma-compactness. Eprint, arXiv:1110.0919 [math.LO], 5 Oct 2011, i,
  380. 2010

    Books

  381. A.V. Troitsky, L.Yu. Rusin, V.V. Aleoshin, (Eds.). Molecular Phylogenetics. Contributions to the 2nd Moscow International Conference “Molecular Phylogenetics” (Moscow, Russia, May 18–21, 2010), Moscow: Torus Press, 2010, 218 стр: ill., ISBN: 978-5-94588-074-0
  382. V.G. Kanovei, V.A. Lyubetsky. Modern Set Theory: Borel and projective sets. Published by Independent Moscow university, 2010, 320 pages, Monograph
  383. Articles

  384. [Q1 2.6 WoS] V.A. Lyubetsky, L.I. Rubanov, A.V. Seliverstov. Lack of conservation of bacterial type promoters in plastids of Streptophyta. Biology Direct, May 2010, Vol. 5, Article 34, DOI: 10.1186/1745-6150-5-34, WOS000278359600001, Scopus: 2-s2.0-77951958863, PMID20459727, eLIBRARY: 15330236,
  385. [РИНЦ] No English citation is currently avaliable for this publication.
    К.Ю. Горбунов, В.А. Любецкий. Об одном алгоритме согласования деревьев генов и видов с учетом дупликаций, потерь и горизонтальных переносов генов. Информационные процессы, 2010, том 10, № 2, стр. 140–144, eLIBRARY17685313, i,
  386. [Q4 1.0 WoS] K.V. Lopatovskaya, A.V. Seliverstov, V.A. Lyubetsky. Attenuation regulation of the amino acid and aminoacyl-tRNA biosynthesis operons in bacteria: a comparative genomic analysis. Molecular Biology, Feb 2010, Vol. 44, No. 1, P. 128–139, DOI: 10.1134/S0026893310010164, WOS000275416200016, Scopus: 2-s2.0-77949289472, eLIBRARY: 15313312,
  387. [Scopus] N.B. Petrov, V.V. Aleshin, A.N. Pegova, M.V. Ofitserov, G.S. Slyusarev. New insight into the phylogeny of Mesozoa: Evidence from the 18S and 28S rRNA genes. Moscow University Biological Sciences Bulletin, 2010, Vol. 65, No. 4, P. 167–169, DOI: 10.3103/S0096392510040127,
  388. [Scopus] K.V. Lopatovskaya, K.Yu. Gorbunov, L.Yu. Rusin, A.V. Seliverstov, V.A. Lyubetsky. The evolution of proline synthesis transcriptional regulation in gammaproteobacteria. Moscow University Biological Sciences Bulletin, 2010, Vol. 65, No. 4, P. 211–212, DOI: 10.3103/S0096392510040255,
  389. [Scopus] K.Yu. Gorbunov, O.N. Laikova, D.A. Rodionov, M.S. Gelfand, V.A. Lyubetsky. Evolution of regulatory motifs of bacterial transcription factors. In Silico Biology, 2010, Vol. 10, No. 3-4, P. 163–183, DOI: 10.3233/ISB-2010-0425, Scopus: 2-s2.0-80052006134, PMID22430290, eLIBRARY: 18087295,
  390. [WoS] J.-Ph. Doyon, C. Scornavacca, K.Yu. Gorbunov, G.J. Szollosi, V. Ranwez, V. Berry. An Efficient Algorithm for Gene/Species Trees Parsimonious Reconciliation with Losses, Duplications and Transfers. In: Comparative Genomics, Lecture Notes in Bioinformatics, Springer-Verlag Berlin Heidelberg, 2010, Vol. 6398, P. 93–108, DOI: 10.1007/978-3-642-16181-0_9, WOS000289457100009, Scopus: 2-s2.0-78649930876, eLIBRARY: 16980033,
  391. E.A. Lysenko. Plastid transcription: bacterial core with eukaryotic extension. In: Plant genetic transformation and molecular markers, A. Kumar (ed), Pointer Publishers, Jaipur, 2010, P. 66–86, ISBN 978-81-7132-613-6
  392. [РИНЦ] No English citation is currently avaliable for this publication.
    А.В. Селиверстов, В.А. Любецкий. О вещественных точках на многообразии четвёртой степени, ближайших к данной точке. Информационные процессы, 2010, том 10, № 3, стр. 245–246, eLIBRARY17685321, i,
  393. [Q3 .5 WoS] V.G. Kanovei. A weak dichotomy below E1 × E3. Topology and Its Applications, June 1 2010, Vol. 157, Iss. 8, P. 1465–1478, DOI: 10.1016/j.topol.2009.03.052, WOS000277677500021, eLIBRARY: 23961208, i,
  394. [Q3 .5 WoS] J. Bagaria, V.G. Kanovei. On coding uncountable sets by reals. Mathematical Logic Quarterly, August 2010, Vol. 56, Iss. 4, P. 409–424, DOI: 10.1002/malq.200910056, WOS000280910700007, eLIBRARY: 15325718, i,
  395. Abstracts

  396. K.Yu. Gorbunov, V.A. Lyubetsky. A fast algorithm of building species supertrees with a set of gene trees. Proceedings of the Seventh International Conference on Bioinformatics of Genome Regulation and Structure\Systems Biology (BGRS\SB'2010), Novosibirsk, Russia, June 20–27 2010, P. 92
  397. A.V. Seliverstov, L.I. Rubanov, V.A. Lyubetsky. Lack of conservation of bacterial type promoters in plastids of Streptophyta. Proceedings of the Seventh International Conference on Bioinformatics of Genome Regulation and Structure\Systems Biology (BGRS\SB'2010), Novosibirsk, Russia, June 20–27 2010, P. 170
  398. No English citation is currently avaliable for this publication.
    О.А. Зверков, А.В. Селиверстов, В.А. Любецкий. Позиционная связь генов пластомов растений и водорослей. Труды 33-й конференции «Информационные технологии и системы» (ИТиС’10), г. Геленджик, 20–24 сентября 2010, стр. 326–330, i,
  399. O.A. Zverkov, A.V. Seliverstov, V.A. Lyubetsky. On an algorithm of protein clustering. Proceedings of the 53th conference of Moscow Institute of Physics and Technology “Modern problems of fundamental and applied sciences”, Moscow, Russia, November 24–29 2010, Part I, Vol. 1, P. 118–119, in Russian
  400. V.A. Lyubetsky, O.A. Zverkov, L.I. Rubanov, A.V. Seliverstov. Interaction between nucleome and plastome: heat shock response regulation in plastids of plants. Proceedings of the Seventh International Conference on Bioinformatics of Genome Regulation and Structure\Systems Biology (BGRS\SB'2010), Novosibirsk, Russia, June 20–27 2010, P. 161,
  401. V.A. Lyubetsky, A.V. Seliverstov. Fast and slow evolution of bacterial type promoters in plastids of Streptophyta. In: Molecular Phylogenetics, Contributions to the 2nd Moscow International Conference “Molecular Phylogenetics” (MolPhy-2), Moscow: Torus Press, 2010, P. 54
  402. K.V. Lopatovskaya, K.Yu. Gorbunov, L.Yu. Rusin, A.V. Seliverstov, V.A. Lyubetsky. The evolution of proline synthesis transcription regulation in gamma proteobacteria. In: Molecular Phylogenetics, Contributions to the 2nd Moscow International Conference “Molecular Phylogenetics” (MolPhy-2), Moscow: Torus Press, 2010, P. 132–133
  403. K.V. Lopatovskaya, L.Yu. Rusin, A.V. Seliverstov, V.A. Lyubetsky. The Evolution of NtcA- and NtcB-regulons in Cyanobacteria and Rhodophyte Chloroplasts. In: Molecular Phylogenetics, Contributions to the 2nd Moscow International Conference “Molecular Phylogenetics” (MolPhy-2), Moscow: Torus Press, 2010, P. 134–135
  404. No English citation is currently avaliable for this publication.
    К.В. Лопатовская, А.В. Селиверстов, В.А. Любецкий. Регулоны факторов NtcA и NtcB у цианобактерий и багрянок. Труды 33-й конференции «Информационные технологии и системы» (ИТиС’10), г. Геленджик, 20–24 сентября 2010, стр. 339–342, i,
  405. No English citation is currently avaliable for this publication.
    М.И. Щелкунов, В.А. Любецкий. Электростатическое поле и длина межгенных областей связаны с диффузией белковых факторов. Труды 33-й конференции «Информационные технологии и системы» (ИТиС’10), г. Геленджик, 20–24 сентября 2010, стр. 382–384, i,
  406. No English citation is currently avaliable for this publication.
    А.В. Селиверстов, В.А. Любецкий. О функции Гильберта множества вершин куба. Труды 53-й научной конференции МФТИ «Современные проблемы фундаментальных и прикладных наук», Москва, 24–29 ноября 2010, М.: МФТИ, 2010, часть I, том 1, стр. 123–124,
  407. V.G. Kanovei, V.A. Lyubetsky. Julius Koenig sets as higher infinity. Abstracts of the International Workshop “Infinite and Infinitesimal in Mathematics, Computing and Natural Sciences”, Grand Hotel San Michele, Cetraro, Italy, May 17–21 2010, University of Calabria, Italy, 2010, P. 27, i,
  408. Preprints

  409. V.G. Kanovei. Linear ROD subsets of Borel partial orders are countably cofinal in the Solovay model. Eprint, arXiv:1004.5542 [math.LO], 30 Apr / 5 Jun 2010, i,
  410. V.G. Kanovei. Linear ROD subsets of Borel partial orders are countably cofinal in Solovay's model. Eprint, arXiv:1005.5534 [math.LO], 30 May / 5 Jun 2010, i,
  411. V.G. Kanovei. On automorphisms behind the Gitik -- Koepke model for violation of the Singular Cardinals Hypothesis w/o large cardinals. Eprint, arXiv:1008.3471 [math.LO], 20 Aug 2010, 20 pages, i,
  412. 2009

    Articles

  413. [Q4 1.0 WoS] K.Yu. Gorbunov, E.V. Lyubetskaya, E.A. Asarin, V.A. Lyubetsky. Modeling evolution of the bacterial regulatory signals involving secondary structure. Molecular Biology, 2009, Vol. 43, No. 3, P. 485–499, DOI: 10.1134/S0026893309030170, WOS000267296800017, Scopus: 2-s2.0-67650653463, eLIBRARY: 13601983,
  414. [Q4 1.0 WoS] K.Yu. Gorbunov, V.A. Lyubetsky. Reconstructing the evolution of genes along the species tree. Molecular Biology, Oct 2009, Vol. 43, No. 5, P. 881–893, DOI: 10.1134/S0026893309050197, WOS000270682000019, Scopus: 2-s2.0-70350350918, eLIBRARY: 15308878,
  415. [Scopus] A.V. Seliverstov, V.A. Lyubetsky. Mechanism of manganese transport regulation in Brucella involving a long RNA helix. Biophysics, 2009, Vol. 54, No. 2, P. 152–155, DOI: 10.1134/S0006350909020055, Scopus: 2-s2.0-70349882116, eLIBRARY: 15306713,
  416. [РИНЦ] No English citation is currently avaliable for this publication.
    А.В. Селиверстов, В.А. Любецкий. Совместная регуляция белков, гомологичных рубредоксину, у диатомовых водорослей и паразитов Piroplasmida. Информационные процессы, 2009, том 9, № 1, стр. 30–33, eLIBRARY17687992, i,
  417. [Q4 .8 WoS] A.V. Seliverstov, E.A. Lysenko, V.A. Lyubetsky. Rapid evolution of promoters for the plastome gene ndhF in flowering plants. Russian Journal of Plant Physiology, Nov 2009, Vol. 56, No. 6, P. 838–845, DOI: 10.1134/S1021443709060144, WOS000271541300014, Scopus: 2-s2.0-70449368973, eLIBRARY: 15303636,
  418. [Q1 4.4 WoS] K.V. Mikhailov, A.V. Konstantinova, M.A. Nikitin, P.V. Troshin, L.Yu. Rusin, V.A. Lyubetsky, Yu.V. Panchin, A.P. Mylnikov, L.L. Moroz, S. Kumar, V.V. Aleoshin. The origin of Metazoa: a transition from temporal to spatial cell differentiation. BioEssays, Jul 2009, Vol. 31, Iss. 7, P. 758–768, DOI: 10.1002/bies.200800214, WOS000267610500009, Scopus: 2-s2.0-70349323101, PMID19472368, eLIBRARY: 15306649, i,
  419. [Q4 1.0 WoS] T.A. Sadovskaya, A.V. Seliverstov. Analysis of the 5'-Leader Regions of Several Plastid Genes in Protozoa of the Phylum Apicomplexa and Red Algae. Molecular Biology, 2009, Vol. 43, No. 4, P. 552–556, DOI: 10.1134/S0026893309040037, WOS000269321200003, Scopus: 2-s2.0-70350761798, eLIBRARY: 15301460,
  420. [Q4 1.0 WoS] V.V. Aleshin, K.V. Mikhailov, A.V. Konstantinova, M.A. Nikitin, L.Yu. Rusin, D.A. Buinova, O.S. Kedrova, N.B. Petrov. On the phylogenetic position of insects in the Pancrustacea clade. Molecular Biology, 2009, Vol. 43, No. 5, P. 804–818, DOI: 10.1134/S0026893309050124, WOS000270682000012, Scopus: 2-s2.0-70350373897, eLIBRARY: 15305753,
  421. [WoS] M.S. Gelfand, A.E. Kazakov, Yu.D. Korostelev, O.N. Laikova, A.A. Mironov, A.B. Rakhmaninova, D.A. Ravcheev, D.A. Rodionov, A.G. Vitreschak. Evolution of Regulatory Systems in Bacteria (Invited Keynote Talk). In: Bioinformatics Research and Applications, Lecture Notes in Bioinformatics, Vol. 5542, Proceedings of the 5th International Symposium, ISBRA 2009, Fort Lauderdale, FL, USA, May 13–16 2009, P. 1–4, DOI: 10.1007/978-3-642-01551-9_1, WOS000265784700001,
  422. [Q4 1.0 WoS] V.V. Aleshin. Comparative genomics, genosystematics, and the scientific school of A.S. Antonov. Molecular Biology, 2009, Vol. 43, Iss. 5, P. 697–700, DOI: 10.1134/S002689330905001X, WOS000270682000001, eLIBRARY: 15299141, i,
  423. No English citation is currently avaliable for this publication.
    В.В. Алешин, Н.Б. Петров. Происхождение насекомых: взгляд генетика. в книге Суперкомпьютерные технологии в науке, образовании и промышленности, Под ред.: акад. В.А. Садовничего, акад. Г.И. Савина, чл.-корр. РАН Вл.В. Воеводина, М.: Изд-во Московского университета, 2009
  424. No English citation is currently avaliable for this publication.
    В.В. Алешин. Молекулярные методы учета биоразнообразия. в книге Разнообразие микробных сообществ внутренних водоемов России, (Учебно-методическон пособие), Ярославль: Принтхаус, 2009, стр. 5–38, i,
  425. [Q4 .4 WoS] A.V. Seliverstov, V.A. Lyubetsky. On symmetric matrices with indeterminate leading diagonals. Problems of Information Transmission, Sep 2009, Vol. 45, No. 3, P. 258–263, DOI: 10.1134/S0032946009030065, WOS000271088300006, Scopus: 2-s2.0-70350507971, eLIBRARY: 15312331,
  426. [Q3 .5 WoS] V.G. Kanovei, V.A. Lyubetsky. Reasonable non-Radon–Nikodym ideals. Topology and Its Applications, Feb 15 2009, Vol. 156, Iss. 5, P. 911–914, DOI: 10.1016/j.topol.2008.11.008, WOS000264470400008, Scopus: 2-s2.0-60249084018, eLIBRARY: 13598368, i,
  427. [Scopus] V.G. Kanovei, V.A. Lyubetsky. Borel reducibility as an additive property of domains. Journal of Mathematical Sciences, 2009, Vol. 158, No. 5, P. 708–712, DOI: 10.1007/s10958-009-9406-2, Scopus: 2-s2.0-67349232744, eLIBRARY: 13608054,
  428. [Q2 .9 WoS] V.G. Kanovei. On Hausdorff ordered structures. Izvestiya: Mathematics, 2009, Vol. 73, No. 5, P. 939–958, DOI: 10.1070/IM2009v073n05ABEH002469, WOS000272485400004, Scopus: 2-s2.0-71449123358, eLIBRARY: 15307004,
  429. Abstracts

  430. V.A. Lyubetsky, E.A. Zhizhina, L.I. Rubanov. Gibbs Field for Evolutionary Analysis of Regulatory Signal of Gene Expression under Constraints on Secondary Structure. The 18th IMACS World Congress on Computational and Applied Mathematics & Applications in Science and Engineering, August 3–5 2009, The University of Georgia, Athens, GA 30602-7404, USA, P. 54
  431. K.Yu. Gorbunov, V.A. Lyubetsky. Inferring gene evolution along a species tree. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’09, Moscow, Russia, July 20–23 2009, P. 120–121
  432. V.A. Lyubetsky, A.V. Seliverstov. Expression Regulation of Plastid Proteins in Parasites, Algae and Plants. Proceedings of the fifth Moscow International Congress “Biotechnology: State of the Art and Prospects of Development”, Moscow, Russia, March 16–20, 2009, Moscow: JSC “Expo-biochem-technologies”, D.I. Mendeleyev University of Chemistry and Technology of Russia, 2009, Part 2, P. 388,
  433. V.A. Lyubetsky, L.I. Rubanov, A.V. Seliverstov. RNA polymerase competition at complementary DNA strands. Proceedings of the Genetics and Selection Meeting and V Congress of the Vavilov Genetics and Selection Society, Moscow, Russia, June 21–27 2009, Part II, P. 68
  434. K.V. Mikhailov, A.V. Konstantinova, M.A. Nikitin, V.V. Aleoshin, L.Yu. Rusin, Yu.V. Panchin. Genomic insights into the origins of metazoan сell differentiation. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’09, Moscow, Russia, July 20–23 2009, P. 9–10
  435. K.V. Lopatovskaya, A.V. Seliverstov, V.A. Lyubetsky. Chlorophyll synthesis regulation in plant chloroplasts. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’09, Moscow, Russia, July 20–23 2009, P. 217–218
  436. V.A. Lyubetsky, K.V. Lopatovskaya. Comparative genomic analysis of the attenuation regulation of amino acid and amino acyl-tRNA biosynthesis operons in bacteria. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’09, Moscow, Russia, July 20–23 2009, P. 219–220
  437. No English citation is currently avaliable for this publication.
    К.В. Лопатовская, О.А. Зверков, А.В. Селиверстов, В.А. Любецкий. Транскрипция генов синтеза пролина у бактерий родов Marinobacter, Pseudomonas и Shewanella регулируется белком семейства tetR. Труды 32-й конференции «Информационные технологии и системы» (ИТиС’09), пос. д/о Бекасово, 15–18 декабря 2009, стр. 278–281, i,
  438. No English citation is currently avaliable for this publication.
    О.А. Зверков, А.В. Селиверстов, Л.И. Рубанов, В.А. Любецкий. Моделирование конкуренции РНК-полимераз: влияние нокаута сигма субъединицы и температуры на экспрессию генов. Труды 32-й конференции «Информационные технологии и системы» (ИТиС’09), пос. д/о Бекасово, 15–18 декабря 2009, стр. 328–331, i,
  439. No English citation is currently avaliable for this publication.
    К.Ю. Горбунов, Е.В. Любецкая. Реконструкция эволюции белковых семейств. Труды 32-й конференции «Информационные технологии и системы» (ИТиС’09), пос. д/о Бекасово, 15–18 декабря 2009, стр. 332–334, i,
  440. No English citation is currently avaliable for this publication.
    В.А. Любецкий, А.В. Селиверстов. Прямые повторы в некодирующих областях хлоропластов у семенных растений. Труды 52-й научной конференции МФТИ «Современные проблемы фундаментальных и прикладных наук», Москва, 27–30 ноября 2009, М.: МФТИ, 2009, часть I, том 1, стр. 116–117, i,
  441. L.Yu. Rusin, V.V. Aleoshin, V.A. Lyubetsky. A phylogenomic pipeline to construct multi-gene datasets and infer multi-gene trees. Proceedings of the international conference “Celebrating Darwin: from the Origin of Species to Deep Metazoan Phylogeny, DMP’09”, Berlin, Germany, March 4–6 2009
  442. V.G. Kanovei, V.A. Lyubetsky, M. Reeken. Nonstandard class and superset theories. Logic and Mathematics, Department of Mathematics, The University of York, August 3–7 2009, P. 21
  443. No English citation is currently avaliable for this publication.
    А.В. Селиверстов, В.А. Любецкий. Об эллипсоидах, внутри которых нет целых точек. Труды 52-й научной конференции МФТИ «Современные проблемы фундаментальных и прикладных наук», Москва, 27–30 ноября 2009, М.: МФТИ, 2009, часть I, том 1, стр. 128–130, i,
  444. 2008

    Books

  445. V.G. Kanovei. Borel equivalence relations: structure and classification. University Lectures series of the AMS, 2008, Vol. 44, 240 pages, ISBN-10: 0-8218-4453-9, ISBN-13: 978-0-8218-4453-3, i
  446. Articles

  447. [Q4 .4 WoS] V.A. Lyubetsky, E.A. Zhizhina, L.I. Rubanov. Gibbs field approach for evolutionary analysis of regulatory signal of gene expression. Problems of Information Transmission, Dec 2008, Vol. 44, No. 4, P. 333–351, DOI: 10.1134/S0032946008040066, WOS000262811900006, Scopus: 2-s2.0-59349118725, eLIBRARY: 13595723,
  448. [Q1 4.5 WoS] A.G. Vitreschak, A.A. Mironov, V.A. Lyubetsky, M.S. Gelfand. Comparative genomic analysis of T-box regulatory systems in bacteria. RNA, Cambridge University Press, Apr 2008, Vol. 14, No. 4, P. 717–735, DOI: 10.1261/rna.819308, WOS000254256800012, Scopus: 2-s2.0-41649115061, PMID18359782, eLIBRARY: 13573346, i,
  449. [Q4 .8 WoS] Ya.O. Zubo, E.A. Lysenko, A.Yu. Aleinikova, V.V. Kusnetsov, N.L. Pshibytko. Changes in the transcriptional activity of barley plastome genes under heat shock. Russian Journal of Plant Physiolog, May 2008, Vol. 55, Iss. 3, P. 293–300, DOI: 10.1134/S1021443708030011, WOS000255877600001,
  450. [РИНЦ] No English citation is currently avaliable for this publication.
    А.В. Селиверстов, В.А. Любецкий. О квадратичных формах, равных единице на большом множестве вершин n-мерного куба. Информационные процессы, 2008, том 8, № 4, стр. 201–204, eLIBRARY17685296, i,
  451. [Q2 .9 WoS] V.G. Kanovei, T. Linton, V.A. Uspensky. Lebesgue measure and gambling. Sbornik: Mathematics, Nov–Dec 2008, Vol. 199, No. 11, P. 1597–1619, DOI: 10.1070/SM2008v199n11ABEH003974, WOS000264258100002, Scopus: 2-s2.0-66149111433, eLIBRARY: 13570983,
  452. [Q4 .4 WoS] Sy-D. Friedman, V.G. Kanovei. Some natural equivalence relations in the Solovay model. Abhandlungen aus dem Mathematischen Seminar der Universitat Hamburg, 2008, Vol. 78, No. 1, P. 91–98, DOI: 10.1007/s12188-008-0003-y, WOS000260634600006, eLIBRARY: 13572446,
  453. V.G. Kanovei, W. Purkert. Mengenlehre — Historische Einfuhrung. In: Gesammelte Werke, Band III Mengenlehre (1927, 1935) Deskriptive Mengenlehre und Topologie, 2008, Teil I, P. 1–40, DOI: 10.1007/978-3-540-76807-4_1,
  454. Abstracts

  455. K.Yu. Gorbunov, V.G. Kanovei, V.A. Lyubetsky. Inferring optimal scenario of gene evolution along a species tree. Abstracts of The Sixth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2008), Novosibirsk, Russia, June 22–28 2008, P. 90, i,
  456. V.A. Lyubetsky, E.A. Zhizhina, L.I. Rubanov. A model of regulatory signal evolution. Abstracts of The Sixth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2008), Novosibirsk, Russia, June 22–28 2008, P. 148, i,
  457. L.I. Rubanov, A.V. Seliverstov, V.A. Lyubetsky. Multiple alignment based on species tree. Abstracts of The Sixth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2008), Novosibirsk, Russia, June 22–28 2008, P. 212, i,
  458. V.A. Lyubetsky, L.I. Rubanov, A.V. Seliverstov. A Tree-based Method of Sequence Alignment. Proceedings of the 9th International Conference of RAS «Pattern Recognition and Image Analysis: New Information Technologies», Nizhniy Novgorod, September 15–20 2008, P. 137–140,
  459. V.A. Lyubetsky. Models of gene expression regulation and evolution of regulatory elements. Proceedings of the Fifth International Conference of Applied Mathematics and Computing, Plovdiv, Bulgaria, August 12–18 2008, P. 17–19
  460. No English citation is currently avaliable for this publication.
    О.А. Зверков. Программный комплекс для согласования набора эволюционных деревьев и выявления эволюционных событий. Труды 51-й научной конференции МФТИ «Современные проблемы фундаментальных и прикладных наук», Москва, 28–30 ноября 2008, М.: МФТИ, 2008, часть 1, стр. 133–136,
  461. No English citation is currently avaliable for this publication.
    К.В. Лопатовская, А.В. Селиверстов, В.А. Любецкий. Об одном подходе к поиску регуляции в дискретных последовательностях. Труды 51-й научной конференции МФТИ «Современные проблемы фундаментальных и прикладных наук», Москва, 28–30 ноября 2008, М.: МФТИ, 2008, часть 1, стр. 141–143,
  462. No English citation is currently avaliable for this publication.
    Е.В. Любецкая, К.Ю. Горбунов. Алгоритмы реконструкции эволюции регуляторных сигналов. Труды 51-й научной конференции МФТИ «Современные проблемы фундаментальных и прикладных наук», Москва, 28–30 ноября 2008, М.: МФТИ, 2008, часть 1, стр. 144–146,
  463. No English citation is currently avaliable for this publication.
    А.В. Селиверстов, В.А. Любецкий. Алгоритмы для поиска многобоксовых сигналов и их применения. Труды 51-й научной конференции МФТИ «Современные проблемы фундаментальных и прикладных наук», Москва, 28–30 ноября 2008, М.: МФТИ, 2008, часть 1, стр. 147–149,
  464. L.Yu. Rusin, V.A. Lyubetsky, S. Kumar. Phylogenomic pipeline and construction of a multi-gene dataset for Metazoa. Proceedings of the Annual Meeting of the Society for Molecular Biology and Evolution SMBE’2008, Barcelona Spain, June 5–8 2008
  465. K.V. Mikhailov, A.V. Konstantinova, M.A. Nikitin, P.V. Troshin, L.Yu. Rusin, V.A. Lyubetsky, Yu.V. Panchin, A.P. Mylnikov, L.L. Moroz, S. Kumar, V.V. Aleoshin. The Gastrea theory in postgenomic age: cell differentiation preceded multicellularity in early metazoan evolution. Proceedings of the ICREA Conference on the Origin and Early Evolution of Metazoans, Barcelona Spain, October 24–25 2008
  466. I. Glotova, V.A. Lyubetsky. Classical attenuation regulation model. Abstracts of The Sixth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2008), Novosibirsk, Russia, June 22–28 2008, P. 85, i,
  467. K.V. Lopatovskaya, A.V. Seliverstov, V.A. Lyubetsky. RNA structures upstream the 2-isopropylmalate synthase encoding gene in alfa-proteobacteria and actinobacteria. Abstracts of The Sixth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2008), Novosibirsk, Russia, June 22–28 2008, P. 144, i,
  468. E.A. Lysenko, A.V. Seliverstov, V.A. Lyubetsky. Analysis of Sig3, Sig4 and Sig6 evolution on new genomic data. Abstracts of The Sixth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2008), Novosibirsk, Russia, June 22–28 2008, P. 147, i,
  469. V.A. Lyubetsky, A.V. Seliverstov. On evolution of promoters in plastomes. Abstracts of The Sixth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2008), Novosibirsk, Russia, June 22–28 2008, P. 217, i,
  470. V.G. Kanovei, V.A. Lyubetsky. Borel reducibility as an additive property of domains. In: Studies in constructive mathematics and mathematical logic. Part XI, Zapiski Nauchnyh Seminarov POMI, Vol. 358, St.Petersburg, POMI, 2008, P. 189–198, in Russian, Mi: znsl2151
  471. Sy-D. Friedman, V.G. Kanovei, V.A. Lyubetsky. On ROD reducibility of equivalence relations in Solovay model. In: Proceedings of the International Conference “Methods of Logic in Mathematics V”, Saint-Petersburg, Russia, June 1–7 2008, P. 6
  472. No English citation is currently avaliable for this publication.
    А.В. Селиверстов, В.А. Любецкий. О квадратичных формах ранга n-2, равных единице на большом множестве вершин n-мерного куба. Труды 51-й научной конференции МФТИ «Современные проблемы фундаментальных и прикладных наук», Москва, 28–30 ноября 2008, М.: МФТИ, 2008, часть 1, стр. 150–153,
  473. Preprints

  474. V.G. Kanovei, V.A. Lyubetsky. Reasonable non--Radon--Nikodym ideals. Eprint, arXiv:0806.4760 [math.LO], 29 Jun 2008, i,
  475. 2007

    Books

  476. V.G. Kanovei, V.A. Lyubetsky. Modern set theory: basics of descriptive dynamics. Nauka, 2007, 231 pages, Monograph, in Russian
  477. Articles

  478. [Q4 1.0 WoS] K.Yu. Gorbunov, V.A. Lyubetsky. Reconstruction of ancestral regulatory signals along a transcription factor tree. Molecular Biology, Oct 2007, Vol. 41, No. 5, P. 836–842, DOI: 10.1134/S0026893307050172, WOS000250240200016, Scopus: 2-s2.0-35349021081, eLIBRARY: 13544074,
  479. [Q4 1.0 WoS] V.A. Lyubetsky, S.A. Pirogov, L.I. Rubanov, A.V. Seliverstov. Modeling classic attenuation regulation of gene expression in bacteria. Journal of Bioinformatics and Computational Biology, Feb 2007, Vol. 5, Iss. 1, P. 155–180, DOI: 10.1142/S0219720007002576, Scopus: 2-s2.0-34248154743, PMID17477496, eLIBRARY: 13557055, i,
  480. [WoS] E. Asarin, Th. Cachat, A. Seliverstov, T. Touili, V. Lyubetsky. Attenuation regulation as a term rewriting system. In: Algebraic Biology, Lecture Notes in Computer Science, Vol. 4545, Springer Berlin / Heidelberg, P. 81–94, Proceedings of the 2nd international conference on Algebraic biology: AB'07, Castle of Hagenberg, Austria, July 2–4 2007, DOI: 10.1007/978-3-540-73433-8_7, WOS000247968300007, Scopus: 2-s2.0-38149136575, eLIBRARY: 13534299,
  481. [Scopus] L.I. Rubanov, V.A. Lyubetsky. RNAmodel web server: modeling classic attenuation in bacteria. In Silico Biology, 2007, Vol. 7, No. 3, P. 285–308, Scopus: 2-s2.0-38949164739, PMID18415978, eLIBRARY: 13540819, i, i,
  482. [РИНЦ] No English citation is currently avaliable for this publication.
    В.А. Любецкий, Е.А. Жижина, К.Ю. Горбунов, А.В. Селиверстов. Модель эволюции нуклеотидной последовательности. Математические методы распознавания образов, 2007, том 13, № 1, стр. 605–609, eLIBRARY29129790,
  483. [РИНЦ] No English citation is currently avaliable for this publication.
    Л.Ю. Русин, Л.И. Рубанов, В.А. Любецкий. Данные для построения эволюционного дерева высших Metazoa. Информационные процессы, 2007, том 7, № 3, стр. 199–213, eLIBRARY22134008, i,
  484. [Q4 1.0 WoS] A.V. Seliverstov, V.A. Lyubetsky. Regulation of proline biosynthesis in proteobacteria. Molecular Biology, May-Jun 2007, Vol. 41, No. 3, P. 513–515, DOI: 10.1134/S002689330703017X, WOS000247814600017, Scopus: 2-s2.0-34547272696, eLIBRARY: 13553008,
  485. [Q4 1.0 WoS] E.V. Lyubetskaya, A.V. Seliverstov, V.A. Lyubetsky. The number of long hairpins in intergenic trailer regions of actinobacteria is far greater than in other genomic regions. Molecular Biology, Aug 2007, Vol. 41, No. 4, P. 670–673, DOI: 10.1134/S002689330704022X, WOS000249263700022, Scopus: 2-s2.0-34548441255, eLIBRARY: 13562595,
  486. [Q1 3.7 WoS] M.D. Kazanov, A.G. Vitreschak, M.S. Gelfand. Abundance and functional diversity of riboswitches in microbial communities. BMC Genomics, 2007, Vol. 8, Article 347, DOI: 10.1186/1471-2164-8-347, WOS000253465300002, PMID17908319, i,
  487. [РИНЦ] No English citation is currently avaliable for this publication.
    А.В. Селиверстов, В.А. Любецкий. Структура РНК перед геном 2-изопропилмалат синтазы у некоторых протеобактерий. Информационные процессы, 2007, том 7, № 1, стр. 113–115, eLIBRARY9304479, i,
  488. [Q4 1.7 WoS] V.V. Aleshin, A.V. Konstantinova, K.V. Mikhailov, M.A. Nikitin, N.B. Petrov. Do we need many genes for phylogenetic inference?. Biochemistry (Moscow), 2007, Vol. 72, No. 12, P. 1313–1323, DOI: 10.1134/S000629790712005X, WOS000251969300005, PMID18205615, i,
  489. [Q4 1.0 WoS] N.B. Petrov, A.N. Pegova, O.G. Manylov, N.S. Vladychenskaya, N.S. Mugue, V.V. Aleshin. Molecular phylogeny of Gastrotricha on the basis of a comparison of the 18S rRNA genes: Rejection of the hypothesis of a relationship between Gastrotricha and Nematoda. Molecular Biology, May 2007, Vol. 41, Iss. 3, P. 445–452, DOI: 10.1134/S0026893307030107, WOS000247814600010,
  490. [Q1 1.4 WoS] V.G. Kanovei, V.A. Lyubetskii. Problems of set-theoretic non-standard analysis. Russian Mathematical Surveys, Jan-Feb 2007, Vol. 62, Iss. 1, P. 45–111, DOI: 10.1070/RM2007v062n01ABEH004381, WOS000247727000002, Scopus: 2-s2.0-34547325348, eLIBRARY: 13533917,
  491. [Q3 .6 WoS] V.G. Kanovei, V.A. Lyubetskii, M. Reeken. Reducibility of Monadic equivalence relations. Mathematical Notes, May-Jun 2007, Vol. 81, Iss. 5-6, P. 757–766, DOI: 10.1134/S0001434607050239, WOS000247942500023, Scopus: 2-s2.0-34547245457, eLIBRARY: 13539883,
  492. [Q3 .6 WoS] V.A. Lyubetskii, S.A. Pirogov. Nonstandard representations of locally compact groups. Mathematical Notes, Sep-Oct 2007, Vol. 82, Iss. 3-4, P. 341–346, DOI: 10.1134/S0001434607090064, WOS000250565600006, Scopus: 2-s2.0-36048987356, eLIBRARY: 13534159,
  493. [Q4 .4 WoS] K.Yu. Gorbunov. Bound on the cardinality of a covering of an arbitrary randomness test by frequency tests. Problems of Information Transmission, 2007, Vol. 43, No. 1, P. 48–56, DOI: 10.1134/S0032946007010061, WOS000255299000006, Scopus: 2-s2.0-34247587197,
  494. No English citation is currently avaliable for this publication.
    В.Г. Кановей, В.А. Любецкий. Борелевская сводимость как аддитивное свойство областей. Препринты ПОМИ РАН, 2007, № 1, стр. 305–314, eLIBRARY9574343,
  495. Abstracts

  496. K.Yu. Gorbunov, D. Radionov, O.N. Laikova, M.S. Gelfand, V.A. Lyubetsky. Reconstruction of ancestral regulatory signal along a phylogeny. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’07, Moscow, Russia, July 27–31 2007, P. 111–113,
  497. K.Yu. Gorbunov, V.A. Lyubetsky. Modeling evolution of the nucleotide sequence with secondary structure. Proceedings of the international scientific conference “Computational Phylogenetics and Molecular Systematics, CPMS’2007”, Moscow, Russia, November 16–19 2007, KMK Scientific Press, P. 68–75
  498. V.A. Lyubetsky, A.V. Seliverstov, K.Yu. Gorbunov. Models of gene expression regulation and evolution of regulatory elements. Proceedings of the international scientific conference “Computational Phylogenetics and Molecular Systematics, CPMS’2007”, Moscow, Russia, November 16–19 2007, KMK Scientific Press, P. 158–165
  499. L.Yu. Rusin, V.A. Lyubetsky. Algorithms to model gene evolution events and reconstruct multigene phylogenies of species. Proceedings of the international conference “Computational Phylogenetics and Molecular Systematics, CPMS’2007”, Moscow, Russia, November 16–19 2007, KMK Scientific Press, P. 274–277
  500. V.A. Lyubetsky, A.V. Seliverstov. Long helices in mRNA processing. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’07, Moscow, Russia, July 27–31 2007, P. 189–191,
  501. V.A. Lyubetsky, A.V. Seliverstov, O.A. Zverkov. RNA Structures upstream leuA Genes in α-proteobacteria. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’07, Moscow, Russia, July 27–31 2007, P. 191–192,
  502. L.Yu. Rusin, V.A. Lyubetsky. Phylogenomics of Metazoa: constructing the gene set. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’07, Moscow, Russia, July 27–31 2007, P. 267–268,
  503. A.G. Vitreschak, A.A. Mironov, V.A. Lyubetsky, M.S. Gelfand. Function and evolutionary analysis of the T-box regulon in bacteria. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’07, Moscow, Russia, July 27–31 2007, P. 309–310,
  504. A.G. Vitreschak, V.A. Lyubetsky, M.S. Gelfand. Analysis of evolution of T-box regulatory elements prediction of amino acid transporters and other amino acid related genes. Proceedings of the international scientific conference “Computational Phylogenetics and Molecular Systematics, CPMS’2007”, Moscow, Russia, November 16–19 2007, KMK Scientific Press, P. 30–37
  505. N.B. Petrov, V.V. Aleshin, I.P. Vladychenskaya, O.G. Manylov, G.S. Slyusarev, A.N. Pegova, L.Yu. Rusin, M.V. Ophitserov. Combined 18S and 28S rRNA gene sequences suggest relatedness of gastrotrichs and dicyemids to flat worms, and orthonectids – to annelids. Proceedings of the international scientific conference “Computational Phylogenetics and Molecular Systematics, CPMS’2007”, Moscow, Russia, November 16–19 2007, KMK Scientific Press, P. 249–252
  506. A.V. Seliverstov, E.A. Lysenko, V.A. Lyubetsky. Rapid evolution of promoters in Magnoliophyta chloroplasts. Proceedings of the international scientific conference “Computational Phylogenetics and Molecular Systematics, CPMS’2007”, Moscow, Russia, November 16–19 2007, KMK Scientific Press, P. 286–292
  507. No English citation is currently avaliable for this publication.
    А.Г. Витрещак, А.А. Миронов, В.А. Любецкий, М.С. Гельфанд. Компьютерный анализ, функциональная аннотация и изучение эволюции Т-бокс регулона в бактериях Компьютерный анализ, функциональная аннотация и изучение эволюции Т-боксового реглона у бактерий. Труды 30-й конференции «Информационные технологии и системы» (ИТиС’07), Звенигород, 18–21 сентября 2007, стр. 220–221, i,
  508. No English citation is currently avaliable for this publication.
    И. Глотова, Л.И. Рубанов, А.В. Селиверстов, В.А. Любецкий. Псевдоузлы и РНК-триплексы в модели классической аттенюаторной регуляции. Труды 30-й конференции «Информационные технологии и системы» (ИТиС’07), Звенигород, 18–21 сентября 2007, стр. 222–227, i,
  509. No English citation is currently avaliable for this publication.
    А.В. Селиверстов, В.А. Любецкий. Кластеризация и поиск промоторов у хлоропластов. Труды 30-й конференции «Информационные технологии и системы» (ИТиС’07), Звенигород, 18–21 сентября 2007, стр. 321–323, i,
  510. Preprints

  511. No English citation is currently avaliable for this publication.
    В.Г. Кановей, В.А. Любецкий. Борелевская сводимость сохраняется при счетном дизъюнктном объединении борелевских множеств. Препринт Петербургского отделения Математического института РАН, 2007, i
  512. V.G. Kanovei. A weak dichotomy below E_1 \times E_3. Eprint, arXiv:0707.2706 [math.LO], 18 Jul 2007, i,
  513. 2006

    Articles

  514. [Q4 1.0 WoS] V.A. Lyubetsky, L.I. Rubanov, A.V. Seliverstov, S.A. Pirogov. Model of gene expression regulation in bacteria via formation of RNA secondary structures. Molecular Biology, May-Jun 2006, Vol. 40, No. 3, P. 440–453, DOI: 10.1134/S0026893306030113, WOS000238266900011, Scopus: 2-s2.0-33747627658, eLIBRARY: 13510198,
  515. V.A. Lyubetsky, K.Yu. Gorbunov, L.Yu. Rusin, V.V. V'yugin. Algorithms to reconstruct evolutionary events at molecular level and infer species phylogeny. In: Bioinformatics of Genome Regulation and Structure II, Springer US, 2006, Part 1, P. 189–204, DOI: 10.1007/0-387-29455-4_20, WOS000234508700021,
  516. [РИНЦ] L.A. Leont'yev, V.A. Lyubetsky. An algorithm of searching for proteins coherent with a given phylogenetic profile. Information Processes, 2006, Vol. 6, No. 1, P. 24–32, in Russian
  517. [РИНЦ] A.V. Seliverstov, V.A. Lyubetsky. An algorithm for detecting conserved motifs in nucleotide sequences. Information processes, 2006, Vol. 6, No. 1, P. 33–36, in Russian
  518. [РИНЦ] No English citation is currently avaliable for this publication.
    Е.В. Любецкая, Л.И. Рубанов, А.В. Селиверстов, В.А. Любецкий. Алгоритм поиска мощных вторичных структур в нуклеотидной последовательности и его применение для подсчета числа таких структур в разных областях геномов. Информационные процессы, 2006, том 6, № 3, стр. 258–263, eLIBRARY9170378, i,
  519. [Q4 1.7 WoS] A.V. Lyubetskaya, L.I. Rubanov, M.S. Gelfand. Use of the flux model of amino acid metabolism of Escherichia coli. Biochemistry (Moscow), 2006, Vol. 71, No. 11, P. 1256–1260, DOI: 10.1134/S0006297906110113, WOS000242418300011, PMID17140387,
  520. [Q4 1.0 WoS] A.V. Seliverstov, V.A. Lyubetsky. Translation Regulation of Intron-containing Genes in Chloroplasts. Journal of Bioinformatics and Computational Biology, 2006, Vol. 4, No. 4, P. 783–792, DOI: 10.1142/S0219720006002235, Scopus: 2-s2.0-33750444578, PMID17007067, eLIBRARY: 13530669,
  521. M.S. Gelfand, A.V. Gerasimova, E.A. Kotelnikova, O.N. Laikova, V.Y. Makeev, A.A. Mironov, E.M. Panina, D.A. Ravcheev, D.A. Rodionov, A.G. Vitreschak. Comparative Genomics and Evolution of Bacterial Regulatory Systems. In: Bioinformatics of Genome Regulation and Structure II, Springer US, 2006, Part 1, P. 111–119, DOI: 10.1007/0-387-29455-4_12,
  522. [Q4 .9 WoS] N.P. Zakataeva, E.A. Kutukova, S.V. Gronskiy, P.V. Troshin, V.A. Livshits, V.V. Aleshin. Export of metabolites by the proteins of the DMT and RhtB families and its possible role in intercellular communication. Microbiology, Jul 2006, Vol. 75, Iss. 4, P. 438–448, DOI: 10.1134/S0026261706040126, WOS000239616000012, eLIBRARY: 13531986,
  523. [РИНЦ] L.A. Leont'yev, V.A. Lyubetsky. Mass detection of conserved T-box containing regulatory structures: search results. Information Processes, 2006, Vol. 6, No. 1, P. 20–23, in Russian
  524. [РИНЦ] V.A. Lyubetsky, A.V. Seliverstov. Computation of regulation efficiency of tryptophan biosynthesis in bacteria based on a model of classic attenuation. Information Processes, 2006, Vol. 6, No. 1, P. 55–57, in Russian
  525. [Scopus] A.V. Seliverstov, O.A. Zverkov, V.A. Lyubetsky. Translation of some chloroplast genes is checked to allow for splicing and editing. Biophysics, 2006, Vol. 51, Suppl. 1, P. S18–S22, DOI: 10.1134/S0006350906070049, Scopus: 2-s2.0-44849110969, eLIBRARY: 13529379,
  526. [Q3 .6 WoS] V.G. Kanovei, V.A. Lyubetsky. A Cofinal Family of Equivalence Relations and Borel Ideals Generating Them. Proceedings of the Steklov Institute of Mathematics, 2006, Vol. 252, No. 1, P. 85–103, DOI: 10.1134/S008154380601010X, Scopus: 2-s2.0-33746072961, eLIBRARY: 13527855,
  527. [Q4 WoS] V.G. Kanovei, V.A. Uspensky. Uniqueness of nonstandard extensions. Moscow University Mathematics Bulletin, 2006, Vol. 61, No. 5, P. 3–10, eLIBRARY: 9297010
  528. Dissertations

  529. No English citation is currently avaliable for this publication.
    А.В. Селиверстов. Алгоритм поиска клики в графе, предсказание регуляторных структур РНК и моделирование регуляции биосинтеза триптофана. Автореферат диссертации на соискание учёной степени кандидата физико-математических наук, Москва, 2006, 22 стр., eLIBRARY15909430,
  530. No English citation is currently avaliable for this publication.
    А.В. Селиверстов. Алгоритм поиска клики в графе, предсказание регуляторных структур РНК и моделирование регуляции биосинтеза триптофана. Диссертация на соискание учёной степени кандидата физико-математических наук, Москва, 2006, 102 стр., eLIBRARY16088600,
  531. Abstracts

  532. V.A. Lyubetsky, A.V. Seliverstov. Modeling classic attenuation regulation of gene expression in bacteria. Proceedings of the Fifth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2006), Novosibirsk, Russia, July 16–22 2006, Vol. 1, P. 102–105, WOS000243856400022, i,
  533. L.Yu. Rusin, V.A. Lyubetsky. Refinement of phylogenetic signal in multiple sequence alignment: results of simulation study. Proceedings of the Fifth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2006), Novosibirsk, Russia, July 16–22 2006, Vol. 3, P. 222–224, WOS000243859500049, i,
  534. E.V. Lyubetskaya, A.V. Seliverstov, V.A. Lyubetsky. Detecting hairpins in 3’-untranslated regions of highly expressed genes in Actinobacteria. Proceedings of the Fifth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2006), Novosibirsk, Russia, July 16–22 2006, Vol. 1, P. 99–101, WOS000243856400021, i,
  535. A.V. Seliverstov, V.A. Lyubetsky. Translation regulation in chloroplasts. Proceedings of the Fifth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2006), Novosibirsk, Russia, July 16–22 2006, Vol. 1, P. 146–149, WOS000243856400033, i,
  536. K.Yu. Gorbunov, V.A. Lyubetsky. Inferring regulatiory signal profiles and evolutionary events. Proceedings of the Fifth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2006), Novosibirsk, Russia, July 16–22 2006, Vol. 3, P. 151–154, WOS000243859500031, i,
  537. A.G. Vitreschak, V.A. Lyubetsky, M.S. Gelfand. Evolutional and functional analysis of T-box regulon in bacteria: identification of new genes involved in amino acid metabolism. Proceedings of the Fifth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2006), Novosibirsk, Russia, July 16–22 2006, Vol. 3, P. 236–240, WOS000243859500053, i,
  538. V.G. Kanovei, M. Reeken. Effective cardinals in the nonstandard universe. Proceedings of the 9th Asian Logic Conference “Mathematical Logic in Asia”, Novosibirsk, Russia, August 16–19 2005, World Scientific Publishers, 2006, P. 113–144, DOI: 10.1142/9789812772749_0009, WOS000244679700009
  539. Preprints

  540. V.G. Kanovei. Varia. Ideals and Equivalence Relations. Eprint, arXiv:math/0603506 [math.LO], 21 Mar 2006, i,
  541. V.G. Kanovei. Varia: Ideals and Equivalence Relations, beta-version. Eprint, arXiv:math/0610988 [math.LO], 31 Oct 2006, i,
  542. Other

  543. L.Yu. Rusin, V.A. Lyubetsky, O.A. Zverkov, K.Yu. Gorbunov, V.V. V'yugin. Signal concentration in multiple sequence alignment: empirical and simulation studies. Society for Molecular Biology and Evolution Meeting SMBE'2006: Genomes, Evolution and Bioinformatics (GEB2006) conference, Tempe, Arizona, USA, May 24–28 2006, poster presentation, i
  544. No English citation is currently avaliable for this publication.
    А.Г. Витрещак. Регуляторные РНК-переключатели. Международная школа «биоинформатика, геномика и протеоимка», Алматы, 11–16 апреля 2006, доклад
  545. 2005

    Articles

  546. [Q4 1.0 WoS] K.Yu. Gorbunov, V.A. Lyubetsky. Identification of Ancestral Genes That Introduce Incongruence between Protein- and Species Trees. Molecular Biology, Sep-Oct 2005, Vol. 39, No. 5, P. 741–751, DOI: 10.1007/s11008-005-0089-6, Scopus: 2-s2.0-27744576123, eLIBRARY: 13498057,
  547. [Q4 1.0 WoS] L.A. Leontiev, A.V. Seliverstov, V.A. Lyubetsky. Algorithm for a Large-Scale Search for T-Box Transcription Regulation in Bacteria. Molecular Biology, Nov-Dec 2005, Vol. 39, No. 6, P. 946–948, DOI: 10.1007/s11008-005-0117-6, Scopus: 2-s2.0-29544436266, eLIBRARY: 13495955,
  548. [РИНЦ] V.A. Lyubetsky, A.V. Seliverstov. Searching for conservative motifs in leader regions of genes on a fixed species tree. Information Processes, 2005, Vol. 5, No. 4, P. 265–270, in Russian
  549. [РИНЦ] V.A. Lyubetsky, K.Yu. Gorbunov, S.A. Pirogov, L.I. Rubanov, A.V. Seliverstov. An algorithm and search results for a model of gene expression regulation with RNA secondary structures in bacteria. Information Processes, 2005, Vol. 5, No. 5, P. 337–366, in Russian
  550. [РИНЦ] V.A. Lyubetsky, K.Yu. Gorbunov, V.V. V'yugin, L.Yu. Rusin. Removing noise in protein multiple alignment. Information Processes, 2005, Vol. 5, No. 5, P. 380–391, in Russian
  551. [РИНЦ] V.A. Lyubetsky. Mathematic models of evolution and gene expression regulation. Mathematical Methods of Pattern Recognition, 2005, Vol. 12, No. 1, P. 366–368, in Russian, eLIBRARY: 28283140
  552. [Q4 1.0 WoS] V.A. Lyubetsky, A.V. Seliverstov. Expression Regulation of the Amino Acid Biosynthesis and Aminoacyl-tRNA Synthase Genes in Actinobacteria. Molecular Biology, Nov-Dec 2005, Vol. 39, No. 6, P. 942–945, DOI: 10.1007/s11008-005-0116-7, Scopus: 2-s2.0-29544450424, eLIBRARY: 13478863,
  553. [Q2 2.8 WoS] A.V. Seliverstov, H. Putzer, M.S. Gelfand, V.A. Lyubetsky. Comparative analysis of RNA regulatory elements of amino acid metabolism genes in Actinobacteria. BMC Microbiology, Oct 3 2005, Vol. 5, Article 54, 14 pp., DOI: 10.1186/1471-2180-5-54, WOS000232601100002, Scopus: 2-s2.0-26844492911, PMID16202131, eLIBRARY: 13481689,
  554. [РИНЦ] A.V. Seliverstov, V.A. Lyubetsky. Translation regulation in chloroplasts. Information Processes, 2005, Vol. 5, No. 5, P. 400–404, in Russian № [U] https://istina.msu.ru/publications/article/19793310/
  555. [РИНЦ+ВАК] V.V. Aleshin, A.P. Mylnikov, N.B. Petrov. Philogenetic Tree of Rhizopoda. Priroda, Aug 2005, No. 8, P. 40–46, in Russian, eLIBRARY: 17359842
  556. [РИНЦ+ВАК] V.V. Aleshin, A.P. Mylnikov, N.B. Petrov. Philogenetic Tree of Rhizopoda. Priroda, Sep 2005, No. 9, P. 65–72, in Russian, eLIBRARY: 17359904
  557. [Q3 .6 WoS] V.G. Kanovei, V.A. Lyubetsky. Perfect subsets of invariant CA-sets. Mathematical Notes, Mar-Apr 2005, Vol. 77, No. 3-4, P. 307–310, DOI: 10.1007/s11006-005-0031-1, WOS000228965300002, Scopus: 2-s2.0-20244383975, eLIBRARY: 13497341,
  558. [Q4 WoS] V.G. Kanovei, V.A. Uspensky. Equivalence of two forms of the continuum hypothesis. Vestnik Moskovskogo Universiteta. Ser. 1 Matematika Mekhanika, 2005, No. 3, P. 62–64, eLIBRARY: 9133206
  559. Dissertations

  560. No English citation is currently avaliable for this publication.
    В.В. Алёшин. Синапоморфные признаки в РНК малой субъединицы рибосом беспозвоночных. Автореферат диссертации на соискание ученой степени доктора биологических наук по специальности 03.00.03 - Молекулярная биология, Москва, 2005, 48 стр., eLIBRARY15835486
  561. No English citation is currently avaliable for this publication.
    В.В. Алёшин. Синапоморфные признаки в РНК малой субъединицы рибосом беспозвоночных. Диссертация на соискание ученой степени доктора биологических наук по специальности 03.00.03 - Молекулярная биология, Москва, 2005, 350 стр., eLIBRARY16071860
  562. Abstracts

  563. V.A. Lyubetsky, S.A. Pirogov. A model for bacterial gene expression regulation with secondary RNA structures. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’05, Moscow, Russia, July 18–21 2005, P. 214–216
  564. V.A. Lyubetsky, V.V. V'yugin. A model for evolutionary event reconstruction. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’05, Moscow, Russia, July 18–21 2005, P. 217–219
  565. K.Yu. Gorbunov, V.A. Lyubetsky. Algorithms to reconstruct ancestral gene evolution events. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’05, Moscow, Russia, July 18–21 2005, P. 128–129
  566. L.Yu. Rusin, V.V. V'yugin, V.A. Lyubetsky. Enhancing phylogenetic inference: concentration of the signal in sequence data. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’05, July 18–21 2005, P. 342–346
  567. V.A. Lyubetsky, S.A. Pirogov. A model of attenuator regulation in bacteria. Proceedings of the VII International Conference “Complex Systems: Control and Modeling Problems”, Samara, Russia, June 27 – July 1 2005, P. 205–209, in Russian
  568. S.A. Pirogov, K.Yu. Gorbunov, V.A. Lyubetsky. Macro- and microconditions in a model of attenuator regulation of gene expression in bacteria. Proceedings of the VII International Conference “Complex Systems: Control and Modeling Problems”, Samara, Russia, June 27 – July 1 2005, P. 210–215, in Russian
  569. L.A. Leont'yev, A.V. Seliverstov, V.A. Lyubetsky. An algorithm for mass searching of T-box structures in bacteria. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’05, Moscow, Russia, July 18–21 2005, P. 202–206
  570. L.Yu. Rusin, V.V. V'yugin, V.A. Lyubetsky. A method to optimize primary sequence data for enhanced tree resolution. Proceedings of the 4th European Conference on Computational Biology ECCB 2005, Madrid, Spain, September 28 – October 01 2005
  571. L.Yu. Rusin, V.V. V'yugin, V.A. Lyubetsky. Phylogenetic signal vs. informational noise: combat for resolution. Proceedings of the international conference “9th Evolutionary Biology Meeting”, Marseille, France, September 21–23 2005
  572. L.Y. Rusin, V.G. Gagarin, M. Blaxter, V.V. Aleshin. Molecular evidence brings the roots of the Secernentea, the major group of round worms, in shaper focus. Proceedings of the international conference “9th Evolutionary Biology Meeting”, Marseille, France, September 21–23 2005
  573. V.A. Lyubetsky, A.V. Seliverstov. RNA regulatory structures in Actinobacteria and Cyanobacteria. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’05, Moscow, Russia, July 18–21 2005, P. 351–353
  574. A. Vitreschak, G. Kucherov. Computer prediction of H-NS regulon in E. coli. Comparative analysis of regulation of rrn operons in proteobacteria. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’05, Moscow, Russia, July 18–21 2005, P. 403–405
  575. V.A. Lyubetsky, A.V. Seliverstov. Translation regulation in Actinobacteria and Cyano-bacteria based on mRNA secondary structures. Proceedings of the VII International Conference “Complex Systems: Control and Modeling Problems”, Samara, Russia, June 27 – July 1 2005, P. 216–221, in Russian
  576. L.A. Leont'yev, A.V. Seliverstov, V.A. Lyubetsky. Transcription regulation with T-boxes. Proceedings of the VII International Conference “Complex Systems: Control and Modeling Problems”, Samara, Russia, June 27 – July 1 2005, P. 222–224, in Russian
  577. L.Yu. Rusin, V.G. Gagarin, M. Blaxter, V.V. Aleoshin. The origin of Secernentea and phylogenesis of Chromadoria: evidence from SSU rRNA. Russian Journal of Nematology, 2005, Vol. 13, No. 1, P. 115, Abstract of the Sixth English Language International Symposium of the Russian Society of Nematologsts (Moscow, 13th-17th, 2005)
  578. V.G. Kanovei, V.A. Lyubetsky. A cofinal family of equivalence relations generated by Borel ideals. Abstracts of the A.S.L. European Summer Meeting “Logic Colloquium '05”, Athens, Greece, July 28 – August 3 2005, P. 83, i
  579. Preprints

  580. V.G. Kanovei, M. Reeken. Effective cardinals in the nonstandard universe. Eprint, arXiv:math/0512054 [math.LO], 2 Dec 2005, i,
  581. 2004

    Books

  582. V.A. Lyubetsky. Basic notions of elementary mathematics. (university text book), Iris-press, 2004, 625 pages, in Russian
  583. V.G. Kanovei, M. Reeken. Nonstandard Analysis, Axiomatically. Series: Springer Monographs in Mathematics, 2004, XVI+408 pages, ISBN: 978-3-540-22243-9, i
  584. Articles

  585. [Q3 1.7 WoS] A.G. Vitreschak, E.V. Lyubetskaya, M.A. Shirshin, M.S. Gelfand, V.A. Lyubetsky. Attenuation regulation of amino acid biosynthetic operons in proteobacteria: comparative genomics analysis. FEMS Microbiology Letters, May 15 2004, Vol. 234, Iss. 2, P. 357–370, DOI: 10.1016/j.femsle.2004.04.005, WOS000221516100023, Scopus: 2-s2.0-2342475660, PMID15135544, eLIBRARY: 13450571,
  586. [РИНЦ] V.A. Lyubetsky, A.V. Seliverstov. Note on Cliques and Alignments. Information Processes, 2004, Vol. 4, No. 3, P. 241–246, eLIBRARY: 9124534, i,
  587. [Q1 4.4 WoS] O.G. Manylov, N.S. Vladychenskaya, I.A. Milyutina, O.S. Kedrova, N.P. Korokhov, G.A. Dvoryanchikov, V.V. Aleshin, N.B. Petrov. Analysis of 18S rRNA gene sequences suggests significant molecular differences between Macrodasyida and Chaetonotida (Gastrotricha). Molecular Phylogenetics and Evolution, Mar 2004, Vol. 30, Iss. 3, P. 850–854, DOI: 10.1016/S1055-7903(03)00251-3, WOS000188958400032, eLIBRARY: 13450111,
  588. [Q1 9.5 WoS] S.I. Nikolaev, C. Berney, J.F. Fahrni, I. Bolivar, S. Polet, A.P. Mylnikov, V.V. Aleshin, N.B. Petrov, J. Pawlowski. The twilight of Heliozoa and rise of Rhizaria, an emerging supergroup of amoeboid eukaryotes. Proceedings of the National Academy of Sciences of the United States of America, May 25 2004, Vol. 101, No. 21, P. 8066–8071, DOI: 10.1073/pnas.0308602101, WOS000221652000042, eLIBRARY: 13459517,
  589. [Q1 11.6 WoS] D.A. Rodionov, A.G. Vitreschak, A.A. Mironov, M.S. Gelfand. Comparative genomics of the methionine metabolism in Gram-positive bacteria: a variety of regulatory systems. Nucleic Acids Research, Jun 23 2004, Vol. 32, No. 11, P. 3340–3353, DOI: 10.1093/nar/gkh659, WOS000222399200015, PMID15215334,
  590. [Q2 1.1 WoS] A.N. Pegova, E. Krasnova, V.V. Aleshin. Evidence from the small and large ribosomal RNA structure suggests that Anoplostoma rectospiculum Gal'tsova, 1976 (Nematoda: Anoplostomatidae) is a member of the superfamily Enoploidea, not Oncholaimoidea. Nematology, 2004, Vol. 6, No. 3, P. 413–421, DOI: 10.1163/1568541042360474, WOS000225158000011, eLIBRARY: 13461797,
  591. [Q2 2.5 WoS] S.I. Nikolaev, V.V. Aleshin, N.B. Petrov, A.P. Mylnikov, C. Berney, J. Fahrni, J. Pawlowski. Molecular phylogenetic analysis places Percolomonas cosmopolitus within Heterolobosea: evolutionary implications. Journal of Eukaryotic Microbiology, Sep-Oct 2004, Vol. 51, No. 5, P. 575–581, DOI: 10.1111/j.1550-7408.2004.tb00294.x, WOS000224397500012, eLIBRARY: 13473464,
  592. [Q4 .5 WoS] L.Yu. Roussine, P. De Ley, M. Blaxter, A. Vierstraete, V.V. Aleoshin. The SSU rRNA gene as a phylogenetic marker within major groups of Nematoda. Russian Journal of Nematology, 2004, Vol. 11, No. 2, P. 145–146
  593. [РИНЦ] N.A. Kusnetsov, V.A. Lyubetsky, A.V. Chernavsky. On the concept of informational interaction, 3: speech intellect. Information Processes, 2004, Vol. 4, No. 2, P. 117–126, in Russian
  594. [РИНЦ] A.V. Seliverstov, V.A. Lyubetsky. Properties of cysteine synthesis in Corynebacterium, Mycobacterium and Propionibacterium. Information Processes, 2004, Vol. 4, No. 3, P. 247–250, in Russian, eLIBRARY: 9124535
  595. [Q4 .9 WoS] B.V. Tarakanov, A.A. Yakovleva, V.V. Aleshin. Characterization of enterobacteria producing the low-molecular-weight antibiotics microcins. Microbiology, 2004, Vol. 73, No. 2, P. 150–155, DOI: 10.1023/B:MICI.0000023981.78951.34, eLIBRARY: 13456322,
  596. [Q4 .9 WoS] B.V. Tarakanov, A.A. Yakovleva, T.A. Nikolicheva, N.M. Komkova, A.I. Manukhina, V.V. Aleshin. Expression vector pLF22 for lactic acid bacteria. Microbiology, 2004, Vol. 73, No. 2, P. 170–175, DOI: 10.1023/B:MICI.0000023985.00143.08, eLIBRARY: 13459809,
  597. [Q4 Scopus] V.V. Aleoshin, A.V. Konstantinova, M.A. Nikitin, I.L. Okshtein. On the genetic uniformity of the genus Trichoplax (Placozoa). Russian Journal of Genetics, 2004, Vol. 40, No. 12, P. 1423–1425, DOI: 10.1007/s11177-005-0015-y,
  598. [Q4 WoS] V.V. Aleshin. Whether variable cleavage of Enoplida (Nematoda) is primitive?: Notes to D.A. Voronov article “Comparative embryology of Nematoda and the law of embryonic similarity”. Zhurnal Obshchei Biologii, Jan-Feb 2004, Vol. 65, No. 1, P. 74–80, in Russian, WOS000189348500005, eLIBRARY: 17544980
  599. [Q1 10.6 WoS] A.G. Vitreschak, D.A. Rodionov, A.A. Mironov, M.S. Gelfand. Riboswitches: the oldest mechanism for the regulation of gene expression?. Trends in Genetics, Jan 2004, Vol. 20, Iss. 1, P. 44–50, PMID14698618, DOI: 10.1016/j.tig.2003.11.008, WOS000188226200007,
  600. [Q1 .8 WoS] V.G. Kanovei, S. Shelah. A definable nonstandard model of the reals. Journal of Symbolic Logic, Mar 2004, Vol. 69, No. 1, P. 159–164, DOI: 10.2178/jsl/1080938834, WOS000220185200015, eLIBRARY: 13453427,
  601. [Q3 .6 WoS] V.G. Kanovei, V.A. Lyubetsky. On the set of constructible reals. Proceedings of the Steklov Institute of Mathematics, 2004, Vol. 247, P. 83–114, Mi: tm12
  602. V.G. Kanovei, M. Reeken. Borel irreducibility between two large families of Borel equivalence relations. In: Logic Colloquium ’99, Lecture Notes in Logic, 17, ASL, Cambridge University Press, 2004, P. 100–110, DOI: 10.1017/9781316755921.009,
  603. [РИНЦ] V.A. Lyubetsky, A.V. Seliverstov. Multifraction graphs with two vertices per fraction. Information processes, 2004, Vol. 4, No. 2, P. 127–132, in Russian
  604. Dissertations

  605. No English citation is currently avaliable for this publication.
    Е.В. Любецкая. Массовый поиск аттенюаторной регуляции в геномах протеобактерий. Автореферат диссертации на соискание учёной степени кандидата физико-математических наук, Москва, 2004, 22 стр.,
  606. No English citation is currently avaliable for this publication.
    Е.В. Любецкая. Массовый поиск аттенюаторной регуляции в геномах протеобактерий. Диссертация на соискание учёной степени кандидата физико-математических наук, Москва, 2004, 137 стр., i,
  607. No English citation is currently avaliable for this publication.
    Л.В. Данилова. Компьютерный поиск регуляторных сайтов белок-дезоксирибонуклеинового взаимодействия в геномах бактерий и его приложения. Автореферат диссертации на соискание учёной степени кандидата физико-математических наук, Москва, 2004, 30 стр.,
  608. No English citation is currently avaliable for this publication.
    Л.В. Данилова. Компьютерный поиск регуляторных сайтов белок-дезоксирибонуклеинового взаимодействия в геномах бактерий и его приложения. Диссертация на соискание учёной степени кандидата физико-математических наук, Москва, 2004, 78 стр.
  609. Abstracts

  610. K.Yu. Gorbunov, V.A. Lyubetsky. A model of tryptophan biosynthesis regulation. Proceedings of the Fourth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2004), Novosibirsk, Russia, July 25–30 2004, Vol. 2, P. 53–55, WOS000242400300011, i,
  611. V.A. Lyubetsky, V.V. V'yugin. Measuring the dissimilarity between gene and species trees, the quality of a COG. Proceedings of the Fourth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2004), Novosibirsk, Russia, July 25–30 2004, Vol. 2, P. 281–284, WOS000242400300069, i,
  612. K.Yu. Gorbunov, V.A. Lyubetsky. A model of biosynthesis regulation. Proceedings of the VI International Conference “Complex Systems: Control and Modeling Problems”, Samara, Russia, June 14–17 2004, P. 151–153, in Russian
  613. V.A. Lyubetsky, A.V. Seliverstov. A geometric method of searching for clique in the graph and its application to signal detection. Proceedings of the VI International Conference “Complex Systems: Control and Modeling Problems”, Samara, Russia, June 14–17 2004, P. 154–157, in Russian
  614. E.V. Lyubetskaya, L.A. Leont'yev, M.A. Shirshin, V.A. Lyubetsky. An algorithm to search for complex signals. Proceedings of the VI International Conference “Complex Systems: Control and Modeling Problems”, Samara, Russia, June 14–17 2004, P. 158–162, in Russian
  615. L.A. Leont'yev, M.A. Shirshin, V.A. Lyubetsky. Detection of classical attenuation in bacterial genomes. Proceedings of the Fourth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2004), Novosibirsk, Russia, July 25–30 2004, Vol. 1, P. 116–118, WOS000242399100028, i,
  616. V.A. Lyubetsky, A.V. Seliverstov. Amino acid biosynthesis attenuation in bacteria. Proceedings of the Fourth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2004), Novosibirsk, Russia, July 25–30 2004, Vol. 1, P. 307–310, WOS000242399100077, i,
  617. A. Vitreschak, L. Noe, G. Kucherov. Computer analysis of multiple repeats in bacteria. Proceedings of the Fourth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2004), Novosibirsk, Russia, July 25–30 2004, Vol. 2, P. 297–299, i,
  618. N.A. Kusnetsov, M.S. Gelfand, V.A. Lyubetsky. Bioinformatics of Bacteria: central issues and model types. Proceedings of the VI International Conference “Complex Systems: Control and Modeling Problems”, Samara, Russia, June 14–17 2004, P. 5–11, in Russian
  619. A.G. Vitreschak. Detection of multiple repeats in bacteria. Conference “Indexation de texte et decouverte de motifs. Algorithmique des sequences”, Lille, France, Dec 9–10 2004
  620. L.Yu. Rusin. Circumventing limitations of parsimony heuristic search: screening the equal tree space under minimum homoplasy requirement. Proceedings of the international conference “The Annual New Zealand Phylogenetics Meeting 2004”, Mt Ruapehu, New Zeland, February 15–20 2004
  621. V.G. Kanovei, M. Reeken, S. Shelah. Fully saturated extensions of the standard universe. Abstracts of the International Conference “Logic, Algebra and Geometry”, St.Petersburg, Russia, June 1–7 2004, P. 16–17, i
  622. V.G. Kanovei, M. Reeken, S. Shelah. Fully saturated extensions of the standard universe. Abstracts of the International Congress “Nonstandard Models of Arithmetic and Analysis” (M.ARI.AN. 2004), Pisa, Italy, June 25–26 2004, P. 1, i,
  623. V.G. Kanovei, M. Reeken, S. Shelah. Fully saturated extensions of the standard universe. Timetable and abstracts, Logic Colloquium 2004, Abstracts of the ASL European Summer Meeting “Logic Colloquium 2004”, Torino, Italy, July 25–31 2004, P. 116, i,
  624. Other

  625. V.A. Lyubetsky, K.Yu. Gorbunov, V.V. V'yugin. Inferring evolutionary events, quality of COGs, measuring the dissimilarity between gene and species trees. Presentation abstracts of the EMBO World Phylogenetic Course 2004, Rio de Janeiro, Brazil, Nov 1–7 2004, устное сообщение
  626. 2003

    Articles

  627. [Scopus] V.A. Lyubetsky, V.V. V'yugin. Methods of horizontal gene transfer determination using phylogenetic data. In Silico Biology, 2003, Vol. 3, No. 1-2, P. 17–31, Scopus: 2-s2.0-0041386181, PMID12762843, eLIBRARY: 13427218, i,
  628. [Scopus] L.V. Danilova, V.A. Lyubetsky, M.S. Gelfand. An algorithm for identification of regulatory signals in unaligned DNA sequences, its testing and parallel implementation. In Silico Biology, 2003, Vol. 3, No. 1,2, P. 33–47, Scopus: 2-s2.0-0042388309, PMID12762844, eLIBRARY: 13444743, i,
  629. [Q4 1.0 WoS] V.V. V'yugin, M.S. Gelfand, V.A. Lyubetsky. Identification of Horizontal Gene Transfer from Phylogenetic Gene Trees. Molecular Biology, Jul-Aug 2003, Vol. 37, No. 4, P. 571–584, DOI: 10.1023/A:1025191411933, WOS000185173500014, eLIBRARY: 13438603,
  630. [Q4 1.0 WoS] K.Yu. Gorbunov, A.A. Mironov, V.A. Lyubetsky. Search for Conserved Secondary Structures of RNA. Molecular Biology, Sep-Oct 2003, Vol. 37, No. 5, P. 723–732, DOI: 10.1023/A:1026089011336, WOS000186455600011, Scopus: 2-s2.0-1642578789, eLIBRARY: 13442137,
  631. [Scopus] K.Yu. Gorbunov, V.A. Lyubetsky. An Algorithm for Detecting Common Secondary Structures in a Set of RNA Sequences. Biophysics, 2003, Vol. 48, Suppl. 1, P. S56–S67, Scopus: 2-s2.0-33750574791, eLIBRARY: 13432908
  632. [Scopus] V.A. Lyubetsky, V.V. V'yugin. Reconstruction of Evolutionary Events Basing on Comparison of Gene and Species Trees. Biophysics, 2003, Vol. 48, Suppl. 1, P. S97–S104, Scopus: 2-s2.0-33750535443, eLIBRARY: 13420343
  633. [Q4 1.0 WoS] E.V. Lyubetskaya, L.A. Leont'ev, M.S. Gelfand, V.A. Lyubetsky. Search for Alternative RNA Secondary Structures Regulating Expression of Bacterial Genes. Molecular Biology, Sep-Oct 2003, Vol. 37, No. 5, P. 707–715, DOI: 10.1023/A:1026084910427, WOS000186455600009, Scopus: 2-s2.0-1642538225, eLIBRARY: 13432772,
  634. [Q4 1.0 WoS] L.V. Danilova, M.S. Gelfand, V.A. Lyubetsky, O.N. Laikova. Computer-Assisted Analysis of Regulation of the Glycerol-3-Phosphate Metabolism in Genomes of Proteobacteria. Molecular Biology, Sep-Oct 2003, Vol. 37, No. 5, P. 716–722, DOI: 10.1023/A:1026037027266, WOS000186455600010, eLIBRARY: 13442134,
  635. [Q3 .5 WoS] M.S. Gelfand, V.A. Lyubetsky. Bioinformation science: From experiment to computer analysis and back to experiment again. Vestnik Rossijkoj Akademii Nauk, 2003, Vol. 73, No. 11, P. 963–970, Scopus: 2-s2.0-0347579374
  636. [Q3 .5 WoS] M.S. Gelfand, V.A. Lyubetskii. Bioinformatics: From Experiment to Computer Analysis and Back to Experiment Again. Herald of the Russian Academy of Sciences, Nov-Dec 2003, Vol. 73, Iss. 6, P. 626–632, WOS000188465500008
  637. [Q1 4.5 WoS] A.G. Vitreschak, D.A. Rodionov, A.A. Mironov, M.S. Gelfand. Regulation of the vitamin B12 metabolism and transport in bacteria by a conserved RNA structural element. RNA, Sep 2003, Vol. 9, No. 9, P. 1084–1097, WOS000184970100006, PMID12923257,
  638. [Q1 11.6 WoS] D.A. Rodionov, A.G. Vitreschak, A.A. Mironov, M.S. Gelfand. Regulation of lysine biosynthesis and transport genes in bacteria: yet another RNA riboswitch?. Nucleic Acids Research, Dec 1 2003, Vol. 31, No. 23, P. 6748–6757, WOS000186802500013, PMID14627808,
  639. [Q2 4.0 WoS] D.A. Rodionov, A.G. Vitreschak, A.A. Mironov, M.S. Gelfand. Comparative genomics of the vitamin B12 metabolism and regulation in prokaryotes. Journal of Biological Chemistry, Oct 17 2003, Vol. 278, No. 42, P. 41148–41159, DOI: 10.1074/jbc.M305837200, WOS000185847200091, PMID12869542,
  640. [Q3 2.4 WoS] V.A. Livshits, N.P. Zakataeva, V.V. Aleshin, M.V. Vitushkina. Identification and characterization of the new gene rhtA involved in threonine and homoserine efflux in Escherichia coli. Research in Microbiology, Mar 2003, Vol. 154, Iss. 2, P. 123–135, DOI: 10.1016/S0923-2508(03)00036-6, WOS000182261400008, eLIBRARY: 13442662,
  641. [Q4 1.0 WoS] S.I. Nikolaev, V.V. Aleshin, N.B. Petrov, C. Berney, J. Fahrni, J. Pawlowski, A.P. Mylnikov. Gymnophrys cometa and Lecythium sp. are core Cercozoa: evolutionary implications. Acta Protozoologica, Aug 2003, Vol. 42, No. 3, P. 183–190, WOS000184640300002, eLIBRARY: 13425676,
  642. [Q2 2.5 WoS] B.S. Leander, P.J. Keeling, O.N. Kuvardina, V.V. Aleshin, A.P. Mylnikov. Molecular phylogeny and surface morphology of Colpodella edax (Alveolata): Insights into the phagotrophic ancestry of apicomplexans. Journal of Eukaryotic Microbiology, Sep-Oct 2003, Vol. 55, No. 5, P. 334–340, DOI: 10.1111/j.1550-7408.2003.tb00145.x, WOS000185347000007, eLIBRARY: 13419715,
  643. [Q3 1.7 WoS] E.M. Panina, A.G. Vitreschak, A.A. Mironov, M.S. Gelfand. Regulation of biosynthesis and transport of aromatic amino acids in low-GC Gram-positive bacteria. FEMS Microbiology Letters, May 28 2003, Vol. 222, Iss. 2, P. 211–220, DOI: 10.1016/S0378-1097(03)00303-3, WOS000183239100010, PMID12770710,
  644. [Q4 1.6 WoS] Z. Zhang, J.N. Feige, A.B. Chang, I.J. Anderson, V.M. Brodianski, A.G. Vitreschak, M.S. Gelfand, M.H. Saier. A transporter of Escherichia coli specific for l- and d-methionine is the prototype for a new family within the ABC superfamily. Archives of Microbiology, Aug 2003, Vol. 180, No. 2, P. 88–100, DOI: 10.1007/s00203-003-0561-4, WOS000184860700002, PMID12819857,
  645. [РИНЦ+ВАК] No English citation is currently avaliable for this publication.
    В.В. Алёшин, Н.Б. Петров. Условно нейтральные признаки. Природа, декабрь 2003, № 12, стр. 25–34, eLIBRARY17371169,
  646. [РИНЦ] N.A. Kusnetsov, V.A. Lyubetsky, A.V. Chernavsky. On the concept of informational interaction, 1: pre-psychic level. Information processes, 2003, Vol. 3, No. 1, P. 1–22, in Russian
  647. [РИНЦ] E.V. Lyubetskaya, L.A. Leont'yev, V.A. Lyubetsky. Searching for alternative RNA secondary structures in gamma-proteobacteria. Information processes, 2003, Vol. 3, No. 1, P. 23–38, in Russian
  648. [РИНЦ] V.A. Lyubetsky, K.Yu. Gorbunov. Searching for alternative RNA secondary structures. Information processes, 2003, Vol. 3, No. 1, P. 47–60, in Russian
  649. [РИНЦ] N.A. Kusnetsov, V.A. Lyubetsky, A.V. Chernavsky. On the concept of informational interaction, 2: pre-psychic level. Information processes, 2003, Vol. 3, No. 2, P. 154–172, in Russian
  650. [Q2 1.1 WoS] L.Yu. Rusin, V.V. Aleshin, A.V. Tchesunov, G.I. Atrashkevich. The 18S ribosomal RNA gene of Soboliphyme baturini Petrow, 1930 (Nematoda: Dioctophymida) and its implications for phylogenetic relationships within Dorylaimia. Nematology, 2003, Vol. 5, No. 4, P. 615–628, DOI: 10.1163/156854103322683337, WOS000187933000012, Scopus: 2-s2.0-0348196968, eLIBRARY: 13434350,
  651. [Q1 1.4 WoS] V.G. Kanovei, V.A. Lyubetsky. On some classical problems of descriptive set theory. Russian mathematical surveys, Sep-Oct 2003, Vol. 58, Iss. 5, P. 839–927, DOI: 10.1070/RM2003v058n05ABEH000666, WOS000189179400001, Scopus: 2-s2.0-1542291397, eLIBRARY: 13417662,
  652. [Q4 .4 WoS] P.V. Golubtsov, V.A. Lyubetsky. Stochastic Dynamic Games with Various Types of Information. Problems of Information Transmission, Jul 2003, Vol. 39, No. 3, P. 266–293, DOI: 10.1023/A:1026114615609, WOS000208552600004, eLIBRARY: 14970787,
  653. [РИНЦ+ВАК] P.V. Golubtsov, V.A. Lyubetsky. Informational structure of dynamic games and the information content available to players. Logic research, 2003, Iss. 10, P. 39–49, in Russian
  654. [Q2 .9 WoS] V.G. Kanovei, M. Reeken. Some new results on Borel irreducibility of equivalence relations. Izvestiya: Mathematics, 2003, Vol. 67, No. 1, P. 55–76, DOI: 10.1070/IM2003v067n01ABEH000418, WOS000185513200004, Scopus: 2-s2.0-33748479303, eLIBRARY: 13964943,
  655. [Q3 .5 WoS] V.G. Kanovei, M. Reeken. A theorem on ROD-hypersmooth equivalence relations in the Solovay model. Mathematical Logic Quarterly, May 2003, Vol. 49, Iss. 3, P. 299–304, DOI: 10.1002/malq.200310030, WOS000182874700009, eLIBRARY: 13441354,
  656. [Q2 .7 WoS] V.G. Kanovei, Michael Reeken. Borel and Countably Determined Reducibility in Nonstandard Domain. Monatshefte fur Mathematik, Nov 2003, Vol. 140, No. 3, 197, 231, DOI: 10.1007/s00605-003-0004-y, WOS000186540700002, eLIBRARY: 13419940,
  657. [Q3 .8 WoS] B. Durand, V.G. Kanovei, V.A. Uspensky, N.K. Vereshchagin. Do stronger definitions of randomness exist?. Theoretical Computer Science, Jan 2003, Vol. 290, No. 3, P. 1987–1996, WOS000179441900034, eLIBRARY: 29473063,
  658. [РИНЦ] V.A. Lyubetsky, A.V. Seliverstov. Some algorithms related to finite groups. Information processes, 2003, Vol. 3, No. 1, P. 39–46, in Russian
  659. [Q3 .6 WoS] K.Yu. Gorbunov. A Generalization of the Hilbert Basis Theorem. Mathematical Notes, Sep-Oct 2003, Vol. 74, No. 3-4, P. 483–490, DOI: 10.1023/A:1026187625738, WOS000186455400022, Scopus: 2-s2.0-0345863703, eLIBRARY: 13416954,
  660. Abstracts

  661. E.V. Lyubetskaya, L.A. Leont'yev, V.A. Lyubetsky. Algorithm for detecting alternative secondary RNA structures and mass analysis attenuator regulation in proteobacteria. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’03, Moscow, Russia, July 22–25 2003, P. 144–145
  662. L.V. Danilova, V.A. Lyubetsky, O.N. Laikova. Computer detecting of glycerol-3-phosphate metabolism regulation in proteobacterial genomes. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’03, Moscow, Russia, July 22–25 2003, P. 52–53
  663. K.Yu. Gorbunov, V.A. Lyubetsky. Detecting common secondary structures in a set of RNA sequences and its testing. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’03, Moscow, Russia, July 22–25 2003, P. 83–85
  664. V.A. Lyubetsky, V.V. V'yugin. Complex phylogenetic analysis of evolutionary history for prokaryotes families. Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’03, Moscow, Russia, July 22–25 2003, P. 146–147
  665. A.G. Vitreschak. Identification of RNA 5’ UTR regulatory elements and prediction of RNA riboswitch mechanism of regulation of vitamin biosynthetic and transport genes in bacteria. Proceedings of the International Moscow Conference on Computational Molecular Biology, Moscow, Russia, July 22–25 2003, P. 233
  666. L.Yu. Rusin. Homoplasy matrices: a tool for choosing between alternative topologies?. Proceedings of the 2nd European Conference on Computational Biology ECCB 2003. In conjunction with JOBIM Journees Ouvertes: Biologie, Informatique, Mathematique 2003, Paris, France, September 27–30 2003,
  667. P.V. Golubtsov, V.A. Lyubetsky. The result of an information process depends on the nature and content of information available to its participants. International conference of RAS, Samara, Russia, 2003, P. 445–453, in Russian
  668. V.G. Kanovei, V.A. Lyubetsky. Classic problems of descriptive set theory. Proceedings of IV international Smirnov conference, RAS, Moscow, Russia, 2003, P. 32–34, in Russian
  669. No English citation is currently avaliable for this publication.
    В.Г. Кановей, В.А. Любецкий. О существовании регулярного неопределимого множества вещественных чисел. Труды конференции «Колмогоров и современная математика (100 лет Колмогорову)», Москва, 2003, стр. 690
  670. Preprints

  671. V.G. Kanovei, S. Shelah. A definable nonstandard model of the reals. Eprint, arXiv:math/0311165 [math.LO], 11 Nov 2003, i,
  672. 2002

    Articles

  673. [Q4 1.0 WoS] V.V. V'yugin, M.S. Gelfand, V.A. Lyubetsky. Tree reconciliation: reconstruction of species phylogeny by phylogenetic gene trees. Molecular Biology, Sep-Oct 2002, Vol. 36, No. 5, P. 650–658, DOI: 10.1023/A:1020667228952, WOS000179132500008, Scopus: 2-s2.0-0036407127, eLIBRARY: 13397129,
  674. [РИНЦ] K.Yu. Gorbunov, V.A. Lyubetsky. An algorithm to search for conservative RNA secondary structures in a database of RNA fragments. Information processes, 2002, Vol. 2, No. 1, P. 55–58, in Russian
  675. [РИНЦ] No English citation is currently avaliable for this publication.
    А.Г. Витрещак. Компьютерное предсказание регуляторных сайтов мРНК. Анализ регуляции экспрессии генов биосинтеза аминокислот и генов, кодирующих тРНК-синтетазы в грам-положительных бактериях. Информационные процессы, 2002, том 2, № 1, стр. 91–95, i,
  676. [РИНЦ] L.A. Leont'yev, E.V. Lyubetskaya, V.A. Lyubetsky. Description and performance of a modified algorithm to search for alternative RNA secondary structures. Information processes, 2002, Vol. 2, No. 1, P. 100–105, in Russian
  677. [РИНЦ] V.V. V'yugin, V.A. Lyubetsky. Some approaches to detect HGTs with phylogenetic data. Information processes, 2002, Vol. 2, No. 1, P. 120–140, in Russian
  678. [Q1 11.6 WoS] A.G. Vitreschak, D.A. Rodionov, A.A. Mironov, M.S. Gelfand. Regulation of riboflavin biosynthesis and transport genes in bacteria by transcriptional and translational attenuation. Nucleic Acids Research, Jul 15 2002, Vol. 30, No. 14, P. 3141–3151, Oxford University Press, PMID12136096,
  679. [Q2 4.0 WoS] D.A. Rodionov, A.G. Vitreschak, A.A. Mironov, M.S. Gelfand. Comparative Genomics of Thiamin Biosynthesis in Procaryotes. New Genes and Regulatory Mechanisms. Journal of Biological Chemistry, Dec 13 2002, Vol. 277, No. 50, P. 48949–48959, DOI: 10.1074/jbc.M208965200, PMID12376536,
  680. [Q2 2.5 WoS] B.S. Leander, P.J. Keeling, O.N. Kuvardina, V.V. Aleshin, T.G. Simdyanov, A.P. Mylnikov. The phylogeny of colpodellids (Alveolata) using small subunit rRNA gene sequences suggests they are the free-living sister group to apicomplexans. Journal of Eukaryotic Microbiology, Nov-Dec 2002, Vol. 49, No. 6, P. 498–504, DOI: 10.1111/j.1550-7408.2002.tb00235.x, WOS000179863300012, eLIBRARY: 13405449,
  681. [Q4 WoS] V.V. Aleshin, N.B. Petrov. Molecular evidence of regress in evolution of metazoa. Zhurnal Obshchei Biologii, May-Jun 2002, Vol. 63, No. 3, P. 195–208, in Russian, WOS000176114800001, eLIBRARY: 14961442
  682. [Q4 Scopus] N.B. Petrov, V.V. Aleshin. Conditionally neutral phylogenetic markers of major taxa: a new aspect of the evolution of macromolecules. Russian Journal of Genetics, 2002, Vol. 38, No. 8, P. 877–894, DOI: 10.1023/A:1016879610352,
  683. Abstracts

  684. V.A. Lyubetsky, L.I. Rubanov. Parallel algorithm for searching regulatory signal in bacterial genome. Proceedings of the Third International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2002), Novosibirsk, Russia, July 14–20 2002, Vol. 1, P. 24–27, i,
  685. V.A. Lyubetsky, V.V. V'yugin. Method of horizontal gene transfer determination using phylogenetic data. Proceedings of the Third International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2002), Novosibirsk, Russia, July 14–20 2002, Vol. 2, P. 61–63, i,
  686. E.V. Lyubetsky, V.A. Lyubetsky. Algorithm for searching for alternative secondary RNA structures. Proceedings of the Third International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2002), Novosibirsk, Russia, July 14–20 2002, Vol. 3, P. 14–16, i,
  687. K.Yu. Gorbunov, V.A. Lyubetsky. An algorithm for searching for common secondary structures in a set of RNA sequences. Proceedings of the Third International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2002), Novosibirsk, Russia, July 14–20 2002, Vol. 3, P. 20–22, i,
  688. N.A. Kusnetsov, V.A. Lyubetsky, A.V. Chernavsky. On the concept of informational interaction, 3: speech intellect. Proceedings of the IV International Conference “Complex Systems: Control and Modeling Problems”, Samara, Russia, June 17–23 2002, P. 7–17, in Russian
  689. L.V. Danilova, M.S. Gelfand. Search for regulatory signals in groups of orthologous genes of gamma-proteobacteria. Proceedings of the Third International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2002), Novosibirsk, Russia, July 14–20 2002, Vol. 2, P. 21–22, i,
  690. E.M. Panina, A.G. Vitreschak, A.A. Mironov, M.S. Gelfand. Bioinformatics approach to analysis of regulation of aromatic amino acids biosynthesis in Bacillus/Clostridium group. Proceedings of the Third International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2002), Novosibirsk, Russia, July 14–20 2002, Vol. 2, P. 32–34, i,
  691. A.G. Vitreschak, D.A. Rodionov, A.A. Mironov, M.S. Gelfand. Regulation of bacterial riboflavin genes by a conserved RNA structural element. Proceedings of the Third International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2002), Novosibirsk, Russia, July 14–20 2002, Vol. 2, P. 44–46, i,
  692. A.G. Vitreschak, E.M. Panina, D.A. Rodionov, A.A. Mironov, M.S. Gelfand. Comparative analysis of RNA regulation in bacterial genomes. Proceedings of the Meeting of International Research Scholars of the Howard Hughes Medical Institute, Palm Cove, Australia, June 25–28 2002
  693. A.G. Vitreschak. Computer analysis of regulation of genes, encoding aminoacyl-tRNA synthetases and amino acid biosynthetic proteins in Gram positive bacteria: T-box RNA regulatory element. Prediction of regulation of new genes, including amino acid transporters. Proceedings of the International Summer School "From Genome to Life: Structural, Functional and Evolutionary Approaches", Cargese, Corsica, France, July 15–27 2002, P. 57–58
  694. L.Yu. Roussine, P. De Ley, V.V. Aleshin, N.B. Petrov. A simple molecular diagnostic of marine Enoplida. Proceedings of the Fourth International Congress of Nematology, Tenerife, Spain, 8-13 June 8–13 2002, (Nematology Monographs and Perspectives, V. 2), P. 178, Poster abstract,
  695. L.Yu. Roussine, P. De Ley, V.V. Aleshin, J.R. Vanfleteren, D. Sturhan, A. Vierstraete, M. Blaxter. Phylogeny of Enoplia: parsimony estimations with SSU rDNA sequence data. Proceedings of the Fourth International Congress of Nematology, Tenerife, Spain, 8-13 June 8–13 2002, (Nematology Monographs and Perspectives, V. 2), P. 178, Poster abstract,
  696. L.Yu. Roussine, V.V. Aleshin, A.V. Tchesunov, G.I. Atrashkevich. SSU rRNA gene of Soboliphyme baturini Petrow, 1930 (Nematoda: Dioctophymida) and a reappraisal of molecular bounds of Dorylaimia. Proceedings of the Fourth International Congress of Nematology, Tenerife, Spain, 8-13 June 8–13 2002, (Nematology Monographs and Perspectives, V. 2), P. 178–179, Poster abstract,
  697. Preprints

  698. V.G. Kanovei, M. Reeken. Borel and countably determined reducibility in nonstandard domain. Eprint, arXiv:math/0202290 [math.LO], 27 Feb 2002, 34 pp., i,
  699. V.G. Kanovei, M. Reeken. Some new results on Borel irreducibility of equivalence relations. Eprint, arXiv:math/0203102 [math.LO], 11 Mar 2002, 27 pp., i,
  700. 2001

    Articles

  701. [Q4 1.0 WoS] L.V. Danilova, K.Yu. Gorbunov, M.S. Gelfand, V.A. Lyubetskii. Algorithm of Regulatory Signal Recognition in DNA Sequences. Molecular Biology, Nov-Dec 2001, Vol. 35, No. 6, P. 841–848, DOI: 10.1023/A:1013282101105, WOS000173100100008, Scopus: 2-s2.0-0035497842, eLIBRARY: 13370921,
  702. [РИНЦ] L.V. Danilova, K.Yu. Gorbunov, M.S. Gelfand, V.A. Lyubetsky. An algorithm to detect regulatory signals in DNA sequence data. Information processes, 2001, Vol. 1, No. 1, P. 56–63, in Russian
  703. [РИНЦ] M.S. Gelfand, V.V. V'yugin, V.A. Lyubetsky. An approach to infer evolutionary species tree from multiple gene data. Information processes, 2001, Vol. 1, No. 1, P. 64–77, in Russian
  704. [РИНЦ] V.V. V'yugin, V.A. Lyubetsky. An algorithm to detect horizontal gene transfer events with multiple gene trees. Information processes, 2001, Vol. 1, No. 2, P. 167–177, in Russian
  705. [РИНЦ] K.Yu. Gorbunov, E.V. Lyubetskaya, V.A. Lyubetsky. On two algorithms of searching for alternative RNA structures. Information processes, 2001, Vol. 1, No. 2, P. 178–187, in Russian
  706. [Q4 1.0 WoS] L.Yu. Rusin, V.V. Aleshin, N.S. Vladychenskaya, I.A. Milyutina, O.S. Kedrova, N.B. Petrov. Trefusiidae are a subtaxon of marine Enoplida (Nematoda): evidence from primary structure of hairpin 35 and 48 loops of SSU rRNA gene. Molecular Biology, 2001, Vol. 35, No. 5, P. 778–784, DOI: 10.1023/A:1012394808661, Scopus: 2-s2.0-0035438250, eLIBRARY: 13372649,
  707. [Q3 2.5 WoS] I.A. Milyutina, V.V. Aleshin, O.S. Kedrova, N.B. Petrov, K.A. Mikrjukov. The unusually long small subunit ribosomal RNA gene found in amitochondriate amoeboflagellate Pelomyxa palustris: its rRNA predicted secondary structure and phylogenetic implication. Gene, 11 Jul 2001, Vol. 272, Iss. 1–2, P. 131–139, DOI: 10.1016/S0378-1119(01)00556-X, WOS000170727200015, eLIBRARY: 13374744,
  708. [Q4 1.5 WoS] E.M. Panina, A.G. Vitreschak, A.A. Mironov, M.S. Gelfand. Regulation of Aromatic Amino Acid Biosynthesis in Gamma-Proteobacteria. Journal of Molecular Microbiology and Biotechnology, Oct 2001, Vol. 3, No. 4, P. 529–543, PMID11545272, i,
  709. [РИНЦ+ВАК] No English citation is currently avaliable for this publication.
    В.В. Алёшин, Н.Б. Петров. Регресс в эволюции многоклеточных животных. Природа, 2001, № 7, стр. 62–70,
  710. No English citation is currently avaliable for this publication.
    А.В. Зарелуа, В.А. Любецкий. Предисловие редакторов ко 2-му тому. в книге А. Маллиос «Геометрия векторных пучков», Мир, 2001, 442 стр.
  711. [РИНЦ] No English citation is currently avaliable for this publication.
    К.Ю. Горбунов. Об одной модели информационной зависимости в алгебраической геометрии. Информационные процессы, 2001, том 1, № 2, стр. 147–149, eLIBRARY9117531, i,
  712. [Q3 .5 WoS] V.G. Kanovei. A version of the Jensen–Johnsbraten coding at arbitrary level n ≥ 3. Archive for Mathematical Logic, 2001, Vol. 40, No. 8, P. 615–628, DOI: 10.1007/s001530100087, WOS000173031500004, eLIBRARY: 13376049,
  713. [Q3 .6 WoS] V.G. Kanovei. Nonstandard set theory in ∈-language. Mathematical Notes, 2001, Vol. 70, No. 1-2, P. 42–45, DOI: 10.1023/A:1010265716574, WOS000171684100006, eLIBRARY: 20865624,
  714. [Q3 .5 WoS] J.R.P. Christensen, V.G. Kanovei, M. Reeken. On Borel orderable groups. Topology and Its Applications, Feb 14 2001, Vol. 109, Iss. 3, P. 285–299, DOI: 10.1016/S0166-8641(99)00164-9, WOS000166392200002, eLIBRARY: 519309,
  715. Abstracts

  716. L.V. Danilova, V.A. Lyubetsky. An algorithm to detect regulatory signal: testing and biological applications. Proceedings of the III International Conference “Complex Systems: Control and Modeling Problems”, Samara, Russia, September 3–10 2001, P. 632–634, in Russian
  717. N.A. Kusnetsov, V.A. Lyubetsky, A.V. Chernavsky. On the concept of informational interaction, 2: pre-speech intellect. Proceedings of the III International Conference “Complex Systems: Control and Modeling Problems”, Samara, Russia, September 3–10 2001, P. 25–42, in Russian
  718. A.G. Vitreschak, A.A. Mironov, M.S. Gelfand. Computer prediction of RNA secondary structure. The RNApattern program: searching for RNA secondary structure by the pattern rule. Proceedings of the III International Conference “Complex Systems: Control and Modeling Problems”, Samara, Russia, September 3–10 2001, P. 623–625, in Russian
  719. A.G. Vitreschak. Computer analysis of regulation of genes, encoding aminoacyl-tRNA synthetases and amino acid biosynthetic proteins in Gram positive bacteria: T-box RNA regulatory element. Prediction of regulation of new genes, including amino acid transporters. Abstracts of International School “Artifical Intelligence and Heuristic Methods for Bioinformatics”, Italy, San-Miniato, October 1–11 2001, P. 63
  720. M.S. Gelfand, O.N. Laikova, A.A. Mironov, P.S. Novichkov, E.M. Panina, D.A. Rodionov, A.G. Vitreschak. Comparative analysis of bacterial patterns. Abstracts of Meeting of HHMI International Research Scholars, Vancouver, Canada, June 20–23 2001, P. 75
  721. V.V. Aleshin, L.Yu. Roussine, I.A. Milyutina, O.S. Kedrova, N.S. Vladychenskaya, N.B. Petrov. Analysis of 18S rRNA structure in Araeolaimida taxa sheds light on the internal topology of the monhysterid-secernentian complex within the Nematoda. Russian Journal of Nematology, 2001, Vol. 9, No. 2, P. 143, Abstracts of the Fourth English Language International Symposium of the Russian Society of Nematologists (dedicated to 110th anniversary of Professor A.A. Paramonov, Russia, Moscow, 11th-14th June, 2001)
  722. L.Yu. Roussine, V.V. Aleshin, I.A. Milyutina, O.S. Kedrova, N.S. Vladychenskaya, N.B. Petrov. Primary structure of the loops of helices 35 and 48 of 18S rRNA suggests that Trefusiida is a subtaxon of marine Enoplida (Nematoda). Russian Journal of Nematology, 2001, Vol. 9, No. 2, P. 159–160, Abstracts of the Fourth English Language International Symposium of the Russian Society of Nematologists (dedicated to 110th anniversary of Professor A.A. Paramonov, Russia, Moscow, 11th-14th June, 2001)
  723. L.Yu. Roussine, P. De Ley. Small subunit ribosomal RNA as an evolutionary marker for deep phylogeny within Nematoda. Russian Journal of Nematology, 2001, Vol. 9, No. 2, P. 160, Abstracts of the Fourth English Language International Symposium of the Russian Society of Nematologists (dedicated to 110th anniversary of Professor A.A. Paramonov, Russia, Moscow, 11th-14th June, 2001)
  724. V.A. Lyubetsky, A.V. Seliverstov. A probabilistic algorithm of solving an NP-complete problem. Proceedings of III international conference “Smirnov readings” of RAS, Moscow, Russia, 2001, P. 47–49, in Russian
  725. V.A. Lyubetsky. First projective sets, AE-prefix and quantifiers elimination. Abstracts of International conference on Mathematical Logic, Algebra and Set theory dedicated to the 100-th anniversary of P.S. Novikov, Steklov Mathematical Institute RAS, Moscow, August 27–31 2001, P. 27
  726. 2000

    Books

  727. V.A. Lyubetsky, M.J.A. Larijani. Topics in Classical and Intuitionistic Model Theory. Gardariki, Moscow, Russia, 2000, 390 pages
  728. Articles

  729. [РИНЦ+ВАК] K.Yu. Gorbunov, V.A. Lyubetsky. On an algorithm of detecting regulatory signal in sequence data. Logic research, Moscow, Russia, Nauka, 2000, Iss. 7, P. 159–163, in Russian
  730. [Q3 2.2 WoS] A.B. Shevelev, V.V. Aleoshin, L.A. Trachuk, A.E. Granovsky, Y.N. Kogan, L.M. Rumer, A.V. Serkina, E.V. Semenova, A.M. Bushueva, V.A. Livshits, S.V. Kostrov, A.S. Shcheglov, S.I. Novikova, G.G. Chestukhina. Expression of bacillar glutamyl endopeptidase genes in Bacillus subtilis by a new mobilizable single-replicon vector pLF.. Plasmid, May 2000, Vol. 43, No. 3, P. 190–199, DOI: 10.1006/plas.1999.1455, WOS000087120800002, PMID10783297, eLIBRARY: 13335891,
  731. [Q4 .9 WoS] V.V. Aleshin, E.V. Semenova, B.V. Tarakanov, V.A. Livshits. A family of shuttle vectors for lactic acid bacteria and other gram-positive bacteria based on the plasmid pLF1311 replicon. Microbiology, 2000, Vol. 69, No. 1, P. 63–67, eLIBRARY: 13357097
  732. [Q4 1.0 WoS] A.G. Vitreshchak, M.S. Gel'fand. Computer analysis of control signals in bacterial genomes. Attenuators of operons of aromatic amino acids metabolism. Molecular Biology, 2000, Vol. 34, No. 4, P. 461–467, DOI: 10.1007/BF02759555,
  733. No English citation is currently avaliable for this publication.
    А.В. Зарелуа, В.А. Любецкий. Предисловие редакторов к 1-му тому. в книге А. Маллиос «Геометрия векторных пучков», Мир, 2000, 460 стр.
  734. [Q1 1.0 WoS] V.G. Kanovei. Linearization of definable order relations. Annals of Pure and Applied Logic, Mar 2000, Vol. 102, No. 1–2, P. 69–100, DOI: 10.1016/S0168-0072(99)00013-5, WOS000084782400003, eLIBRARY: 193490, eLIBRARY: 13339255,
  735. [Q3 .5 WoS] V.G. Kanovei, M. Reeken. A nonstandard set theory in the ∈-language. Archive for Mathematical Logic, 2000, Vol. 39, No. 6, P. 403–416, DOI: 10.1007/s001530050155, WOS000089083700002, eLIBRARY: 13340666,
  736. [Q3 .5 WoS] V.G. Kanovei, M. Reeken. Extending Standard Models of ZFC to Models of Nonstandard Set Theories. Studia Logica, 2000, Vol. 64, No. 1, P. 37–59, DOI: 10.1023/A:1005286212737, eLIBRARY: 20898243,
  737. [Q2 .8 WoS] V.G. Kanovei, M. Reeken. New Radon–Nikodym ideals. Mathematika, Dec 2000, Vol. 47, Iss. 1-2, P. 219–227, DOI: 10.1112/S0025579300015837, WOS000177538900018, eLIBRARY: 13358709,
  738. [Q3 .5 WoS] V.G. Kanovei, M. Reeken. On Baire measurable homomorphisms of quotients of the additive group of the reals. Mathematical Logic Quarterly, 2000, Vol. 46, Iss. 3, P. 377–384, DOI: 10.1002/1521-3870(200008)46:3<377::AID-MALQ377>3.0.CO;2-9, WOS000088718400005,
  739. [Q3 .6 WoS] V.G. Kanovei, M. Reeken. On Ulam's Problem of Stability of Non-exact Homomorphisms. Proceedings of the Steklov Institute of Mathematics, 2000, Vol. 231, P. 238–270, Mi: tm518
  740. Abstracts

  741. V.V. V'yugin, K.Yu. Gorbunov, V.A. Lyubetsky. Algorithms of detecting regulatory signal and constructing evolutionary trees. Proceedings of the II International Conference “Complex Systems: Control and Modeling Problems”, Samara, Russia, June 20–23 2000, P. 130–137, in Russian
  742. N.K. Vereschagin, V.A. Lyubetsky. An algorithm of inferring RNA secondary structure. Proceedings of scientific workshop of the Logic Center of RAS, Moscow, RAS, 2000, Iss. 14, P. 99–109, in Russian
  743. N.A. Kusnetsov, V.A. Lyubetsky, A.V. Chernavsky. On the concept of informational interaction, 1: pre-psychic bioinformatics. Proceedings of the II International Conference “Complex Systems: Control and Modeling Problems”, Samara, Russia, June 20–23 2000, P. 8–20, in Russian
  744. A.G. Vitreschak, A.A. Mironov, M.S. Gelfand. Comparative approach of regulation in complete genomes: attenuators of aromatic amino acid operons of gamma-proteobacteria. Proceedings of the II International Conference “Complex Systems: Control and Modeling Problems”, Samara, Russia, June 20–23 2000, P. 141–142, in Russian
  745. A.G. Vitreschak, A.K. Bansal, M.S. Gelfand. Comparative approach to analysis of regulation in complete genomes: attenuators of aromatic amino acid operons of gamma-proteobacteria. Proceedings of the Second International Conference on Bioinformatics of Genome Regulation and Structure (BGRS’2000), Novosibirsk, Russia, August 7–11 2000, Vol. 2, P. 57–58, i,
  746. No English citation is currently avaliable for this publication.
    А.Г. Витрещак, М.С. Гельфанд. Сравнительный подход к анализу регуляции в полных геномах: аттенюаторы ароматических аминокислотных оперонов гамма-протеобактерий. Материалы школы-конференции «Горизонты физико-химической биологии», Пущино, Май 2000, стр. 231
  747. No English citation is currently avaliable for this publication.
    К.Ю. Горбунов. Об оценке матричной сложности множества. Труды II международной конференции «Проблемы управления и моделирования в сложных системах», Самара, 20–23 июня 2000, Самара: Самарский научный центр РАН, 2000, стр. 138–140
  748. 1999

    Articles

  749. N.A. Kuznetsov, V.A. Lyubetskii. Computer Logic in Information Processes. Problems of Information Transmission, 1999, Vol. 35, Iss. 2, P. 107–111, in Russian, Mi: ppi448
  750. N.P. Zakataeva, V.V. Aleshin, I.L. Tokmakova, P.V. Troshin, V.A. Livshits. The novel transmembrane Escherichia coli proteins involved in the amino acid efflux. FEBS Letters, Jun 11 1999, Vol. 452, Iss. 3, P. 228–232, DOI: 10.1016/S0014-5793(99)00625-0, WOS000080954000023, eLIBRARY: 13330883,
  751. V.V. Aleshin, E.V. Semenova, V.G. Doroshenko, Yu.V. Jomantas, B.V. Tarakanov, V.A. Livshits. The broad host range plasmid pLF1311 from Lactobacillus fermentum VKM1311. FEMS Microbiology Letters, Sep 1 1999, Vol. 178, Iss. 1, P. 47–53, DOI: 10.1016/S0378-1097(99)00343-2, WOS000082299800008, eLIBRARY: 13325766,
  752. V.V. Aleshin, N.P. Zakataeva, V.A. Livshits. A new family of amino-acid-efflux proteins. Trends in Biochemical Sciences, Apr 1 1999, Vol. 24, Iss. 4, P. 133–135, DOI: 10.1016/S0968-0004(99)01367-5, WOS000080514400006, eLIBRARY: 27562128,
  753. N.S. Vladychenskaya, O.S. Kedrova, I.A. Milyutina, N.B. Petrov, V.V. Aleshin. Molecular punctuated equilibrium in the evolution of Rhopalura ophiocomae (Mesozoa: Orthonectida) 18S rRNA, hairpin 17. Molecular Biology, 1999, Vol. 33, No. 2, P. 278–287, eLIBRARY: 13322553,
  754. No English citation is currently avaliable for this publication.
    А.Г. Витрещак, М.С. Гельфанд. Компьютерный анализ регуляторных сигналов в полных бактериальных геномах. Инициация трансляции оперонов рибосомальных белков. Биофизика, 1999, том 44, стр. 601–610
  755. V.G. Kanovei. On non-wellfounded iterations of the perfect set forcing. Journal of Symbolic Logic, Jun 1999, Vol. 64, Iss. 2, P. 551–574, DOI: 10.2307/2586484, eLIBRARY: 13313996,
  756. V. Kanovei, M. Reeken. Special model axiom in nonstandard set theory. Mathematical Logic Quarterly, 1999, Vol. 45, Iss. 3, P. 371–384, eLIBRARY: 13313998
  757. R. Diestel, T.R. Jensen, K.Yu. Gorbunov, C. Thomassen. Highly Connected Sets and the Excluded Grid Theorem. Journal of Combinatorial Theory. Series B, Jan 1999, Vol. 75, Iss. 1, P. 61–73, DOI: 10.1006/jctb.1998.1862, WOS000078082100005, Scopus: 2-s2.0-0001853238, eLIBRARY: 13323756,
  758. V.G. Kanovei, M. Reeken. Extension of standard models of ZFC to models of Nelson’s nonstandard set theory IST. Mathematical Notes, 1999, Vol. 66, No. 2, P. 160–166, DOI: 10.1007/BF02674872, eLIBRARY: 20938564,
  759. Abstracts

  760. No English citation is currently avaliable for this publication.
    В.А. Любецкий. Логика устной речи в сравнении с логикой письменной речи. Труды второго философского конгресса, Екатеринбург, 1999, часть 1, стр. 222
  761. No English citation is currently avaliable for this publication.
    В.А. Любецкий. Об основах интеллектуальных процессов. Труды второго философского конгресса, Екатеринбург, 1999, часть 1, стр. 223–224
  762. V.A. Lyubetsky. Logic models of informational interaction processes. Proceedings of the International Conference “Complex Systems: Control and Modeling Problems”, Samara, Russia, May 15–17 1999, P. 133–145, in Russian
  763. M.S. Gelfand, A.G. Vitreschak, A.A. Mironov. Information interactions and regulatory patterns in bacterial genomes. Proceedings of the first International Conference "Complex Systems: Control and modeling problems", Samara, Russia, June 1999, P. 101–105
  764. L.Yu. Rusin, V.V. Aleshin, O.S. Kedrova, I.A. Milyutina, N.S. Vladychenskaya, N.B. Petrov. Molecular evidence for phylogenetic reliability of Araeolaimida sensu stricto. Proceedings of the Zoological Institute of the RAS, 1999, P. 280, Proceedings of the international conference “III International Nematology Symposium”, St.Petersburg, Russia, August 21–27 1999
  765. No English citation is currently avaliable for this publication.
    L.Yu. Roussine. Analysis of the 18S rRNA gene structure in nematodes: the origin of Secernentea. Материалы конференции “Ломоносов 99”, 1999, том 25, VI Международная студенческая конференция по фундаментальным наукам под эгидой ЮНЕСКО «Ломоносов-99», МГУ им. М.В. Ломоносова, Москва, Россия, 20–23 апреля 1999
  766. No English citation is currently avaliable for this publication.
    В.А. Любецкий. О преобразовании классических выводов в интуиционистские. Труды второй международной конференции «Смирновские чтения», Москва, 1999, стр. 38–41
  767. 1998

    Articles

  768. L.Yu. Rusin, V.V. Malakhov. Free-living Marine Nematodes Possess no Eutely. Doklady Biological Sciences, 1998, Vol. 361, P. 331–333
  769. V.V. Aleshin, O.S. Kedrova, I.A. Milyutina, N.S. Vladychenskaya, N.B. Petrov. Secondary structure of some elements of 18S rRNA suggests that strongylid and a part of rhabditid nematodes are monophyletic. FEBS Letters, Jun 5 1998, Vol. 429, Iss. 1, P. 4–8, DOI: 10.1016/S0014-5793(98)00550-X, WOS000074253400002, eLIBRARY: 13299093,
  770. V.V. Aleshin, I.A. Milyutina, O.S. Kedrova, N.S. Vladychenskaya, N.B. Petrov. Phylogeny of Nematoda and Cephalorhyncha Derived from 18S rDNA. Journal of Molecular Evolution, Nov 1998, Vol. 47, Iss. 5, P. 597–605, DOI: 10.1007/PL00006416, WOS000076739900011, eLIBRARY: 13296658,
  771. V.V. Aleshin, B.V. Tarakanov, V.G. Doroshenko. Loss of a stop codon is the cause of repB gene extension in Lactobacillus plasmid pLF1311. Molecular Biology, 1998, Vol. 32, No. 3, P. 338–340, eLIBRARY: 13292854
  772. L.Yu. Rusin, V.V. Malakhov. Inconstancy in cell number in hypodermis of free-living marine nematodes. Russian Journal of Nematology, 1998, Vol. 6, No. 1, Abstracts of papers presented at the Second English Language International Symposium of the Russian Society of Nematologists (Moscow, 23-30 August, 1997)
  773. V.V. Aleshin, O.S. Kedrova, I.A. Milyutina, N.S. Vladychenskaya, N.B. Petrov. Relationships among nematodes based on the analysis of 18S rRNA gene sequences: molecular evidence for monophyly of chromadorian and secernentian nematodes. Russian Journal of Nematology, 1998, Vol. 6, No. 2, P. 175–184, eLIBRARY: 13276389,
  774. V.G. Kanovei, J. Zapletal. Pyramidal structure of constructibility degrees. Mathematical Notes, 1998, Vol. 63, No. 4, P. 556–559, DOI: 10.1007/BF02311261, eLIBRARY: 20943130,
  775. V.G. Kanovei, M. Reeken. Elementary Extensions of External Classes in a Nonstandard Universe. Studia Logica, 1998, Vol. 60, No. 2, P. 253–273, DOI: 10.1023/A:1005064032270, eLIBRARY: 18253636,
  776. V.G. Kanovei. When a partial borel order is linearizable. Fundamenta mathematicae, 1998, Vol. 155, Iss. 3, P. 301–309, eLIBRARY: 13305014
  777. V.G. Kanovei. Ulm Classification of Analytic Equivalence Relations in Generic Universes. Mathematical Logic Quarterly, 1998, Vol. 44, Iss. 3, P. 287–303, DOI: 10.1002/malq.19980440302, eLIBRARY: 13292534,
  778. K.Yu. Gorbunov. On a complexity of the formula (A ∨ B) ⇒ C. Theoretical Computer Science, 6 Nov 1998, Vol. 207, Iss. 2, P. 383–386, DOI: 10.1016/S0304-3975(98)00074-7, eLIBRARY: 13302525, i,
  779. K.Yu. Gorbunov. An Estimate of the Tree-Width of a Planar Graph Which Has Not a Given Planar Grid as a Minor. In: Graph-Theoretic Concepts in Computer Science, Lecture Notes in Computer Science, 1998, Vol. 1517, P. 372–383, DOI: 10.1007/10692760_30, eLIBRARY: 24947049,
  780. Abstracts

  781. A.G. Vitreschak, M.S. Gelfand. Conserved RNA structures regulation initiation of translation of Escherichia coli and Haemophilus influenzae ribosomal protein operons. Abstracts of Theoretical biophysics international school, Moscow, Russia, June 15–20 1998, P. 105
  782. A.G. Vitreschak, A.K. Bansal, M.S. Gelfand. Conserved RNA structures regulate initiation of tranlsation of Escerichia coli and Haemophilus influenzae ribosomal protein operons. Proceedings of the First International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'98), Novosibirsk, Russia, August 24–31 1998, Vol. 1, P. 229, i
  783. 1997

    Articles

  784. No English citation is currently avaliable for this publication.
    В.А. Любецкий, С.Н. Любецкая. О некоторых задачах эффективизации и целенаправленного поведения. Логические исследования, М.: Наука, 1997, вып. 4, стр. 180
  785. V.A. Lyubetsky. Transfer theorems and the algebra of modal operators. Algebra and Logic, 1997, Vol. 36, No. 3, P. 169–181, DOI: 10.1007/BF02671615, eLIBRARY: 31410917,
  786. V.A. Lyubetsky. Transference theorems and intuitionistic set theory. Doklady Mathematics, 1997, Vol. 56, No. 3, P. 851–854, Scopus: 2-s2.0-0040600478, eLIBRARY: 13268005
  787. V.G. Kanovei. An Ulm-type classification theorem for equivalence relations in Solovay model. Journal of Symbolic Logic, Dec 1997, Vol. 62, Iss. 4, P. 1333–1351, DOI: 10.2307/2275646, eLIBRARY: 20949072,
  788. V.G. Kanovei, M. Reeken. Isomorphism property in nonstandard extensions of the ZFC universe. Annals of Pure and Applied Logic, 1997, Vol. 88, No. 1, P. 1–25, eLIBRARY: 13267869
  789. V.G. Kanovei. Non-Glimm-Effros equivalence relations at second projective level. Fundamenta mathematicae, 1997, Vol. 154, Iss. 1, P. 1–35, eLIBRARY: 13252699
  790. V.G. Kanovei. Two dichotomy theorems on colourability of non-analytic graphs. Fundamenta mathematicae, 1997, Vol. 154, Iss. 2, P. 183–201, eLIBRARY: 13254718
  791. V.G. Kanovei. On a spector ultrapower for the Solovay model. Mathematical Logic Quarterly, 1997, Vol. 43, Iss. 3, P. 389–395, eLIBRARY: 13252900
  792. 1996

    Articles

  793. V.G. Kanovei. Topologies generated by effectively Suslin sets, and their applications in descriptive set theory. Russian Mathematical Surveys, 1996, Vol. 51, No. 3, P. 385–417, DOI: 10.1070/RM1996v051n03ABEH002907, WOSA1996WC01100002, Scopus: 2-s2.0-0030504741,
  794. V.G. Kanovei. On external Scott algebras in nonstandard models of Peano arithmetic. Journal of Symbolic Logic, Jun 1996, Vol. 61, Iss. 2, P. 586–607, DOI: 10.2307/2275677, eLIBRARY: 13230633,
  795. V.G. Kanovei, M. Reeken. Internal approach to external sets and universes. Part 3 Partially saturated universes. Studia Logica, 1996, Vol. 56, No. 3, P. 293–322, DOI: 10.1007/BF00372770, eLIBRARY: 31271066,
  796. V.G. Kanovei, M. Reeken. Loeb measure from the point of view of a coin flipping game. Mathematical Logic Quarterly, 1996, Vol. 42, Iss. 1, P. 19–26, eLIBRARY: 13247198
  797. V.A. Lyubetskii. On Some Applications of the Semantic Evaluation Method. Problems of Information Transmission, 1996, Vol. 32, No. 3, P. 290–302, Mi: ppi348
  798. 1995

    Articles

  799. No English citation is currently avaliable for this publication.
    В.А. Любецкий. Теоремы переноса и алгебра модальных операторов. Логические исследования, М.: Наука, 1995, вып. 3, стр. 205–232
  800. V.G. Kanovei, M. Reeken. Internal approach to external sets and universes. Part 1 Bounded set theory. Studia Logica, 1995, Vol. 55, No. 2, P. 229–257, DOI: 10.1007/BF01061236, eLIBRARY: 30846597,
  801. V.G. Kanovei, M. Reeken. Internal approach to external sets and universes. Part 2 External universes over the universe of bounded set theory. Studia Logica, 1995, Vol. 55, No. 3, P. 347–376, DOI: 10.1007/BF01057803, eLIBRARY: 31114831,
  802. V.G. Kanovei, M. Reeken. Summation of divergent series from the nonstandard point of view. Real Analysis Exchange, 1995, Vol. 21, No. 2, P. 473–497, eLIBRARY: 31002425
  803. 1994

    Books

  804. V.G. Kanovei. A course on Foundations of Nonstandard Analysis. (With a preface by. M. Reeken), IPM Lecture Notes Series, Vol. 1, IPM, Tehran, Iran, 1994, 149 pages, i
  805. 1993

    Articles

  806. V.A. Lyubetskii. On One Approach to Modelling Intelligent Systems. Problems of Information Transmission, 1993, Vol. 29, No. 3, P. 295–297, Mi: ppi194
  807. V.A. Lyubetsky. Heyting-Valued Analysis: P. S. Novikov's Hypotheses. Contemporary Mathematics, 1993, Vol. 131, Part 3, P. 565–583
  808. 1992

    Articles

  809. No English citation is currently avaliable for this publication.
    В.А. Любецкий. Локально аксиоматизируемые классы колец, II. Journal of Symbolic Logic, 1992, том 57, № 1, стр. 377
  810. V.G. Kanovei. On the extension principle in internal set theory. Siberian mathematical journal, Nov–Oct 1992, Vol. 33, No. 6, P. 999–1010, DOI: 10.1007/BF00971023,
  811. No English citation is currently avaliable for this publication.
    В.Г. Кановей. Вторые математические чтения памяти М. Я. Суслина. Успехи математических наук, 1992, том 47, вып. 3(285), стр. 197–198, Mi: umn4537,
  812. 1991

    Articles

  813. V.A. Lyubetsky. Intuitionistic theory of algebraic systems and heyting-valid analysis. Algebra and Logic, 1991, Vol. 30, No. 3, P. 208–216, DOI: 10.1007/BF01978854, Scopus: 2-s2.0-34249918213,
  814. V.A. Lyubetsky. Transfer from deducibility in the classical set theory to deducibility in intuitionistic set theory for the language of rings. Algebra and Logic, 1991, Vol. 30, No. 6, P. 427–439, DOI: 10.1007/BF02018738, Scopus: 2-s2.0-34249925232, eLIBRARY: 30835301,
  815. No English citation is currently avaliable for this publication.
    В.А. Любецкий. Гейтинговозначный анализ: гипотеза П.С. Новикова. Journal of Symbolic Logic, 1991, том 56, № 3, стр. 1131
  816. V.G. Kanovei. Cardinality of the set of Vitali equivalence classes. Mathematical Notes, Mar-Apr 1991, Vol. 49, No. 4, P. 370–374, DOI: 10.1007/BF01158211, eLIBRARY: 30854307,
  817. K.Yu. Gorbunov. There does not exist an enumerable family of context-free grammars that generates the class of single-valued languages. Mathematical Notes, Jul-Aug 1991, Vol. 50, Iss. 1, P. 683–687, DOI: 10.1007/BF01156601, eLIBRARY: 30894908,
  818. K.Yu. Gorbunov. Graphs which cannot realize planar grid are deducible in a context-free grammar. Doklady Akademii Nauk SSSR, 1991, Vol. 316, Iss. 2, P. 270–274, in Russian
  819. V.G. Kanovei. Undecidable hypotheses in Edward Nelson's internal set theory. Russian Mathematical Surveys, Nov-Dec 1991, Vol. 46, No. 6, P. 1–54, DOI: 10.1070/RM1991v046n06ABEH002870,
  820. Dissertations

  821. No English citation is currently avaliable for this publication.
    В.А. Любецкий. Оценки и пучки: теоремы переноса. Автореферат диссертации на соискание ученой степени доктора физико-математических наук по специальности 01.01.06 - Математическая логика, алгебра и теория чисел, Москва, 1991, 34 стр., eLIBRARY30136185,
  822. 1990

    Articles

  823. V.A. Lyubetsky. Model-completeness of a theory and evaluation of formulas. Algebra and Logic, 1990, Vol. 29, No. 1, P. 10–22, DOI: 10.1007/BF01980216, Scopus: 2-s2.0-34249924467,
  824. No English citation is currently avaliable for this publication.
    В.А. Любецкий. Гейтинговозначный анализ: гипотеза П.С. Новикова. в книге Основания неклассических логик, М.: АН СССР, 1990, стр. 105–119
  825. V.A. Lyubetsky. On some applications of Heyting-valued analysis II. In: COLOG-88, Lecture Notes in Computer Science, Vol. 417, Springer, 1990, P. 122–145, Proceedings of the International Conference on Computer Logic, Tallinn, USSR, December 12–16 1988, DOI: 10.1007/3-540-52335-9_53, eLIBRARY: 30909549,
  826. No English citation is currently avaliable for this publication.
    В.Г. Кановей. Математические чтения памяти М. Я. Суслина. Успехи математических наук, 1990, том 45, вып. 2(272), 231, Mi: umn4734,
  827. 1989

    Articles

  828. V.A. Lyubetskii. Valuations and sheaves. On some questions of non-standard analysis. Russian Mathematical Surveys, Jul-Aug 1989, Vol. 44, No. 4, P. 37–112, DOI: 10.1070/RM1989v044n04ABEH002140, WOSA1989DG00100003, Scopus: 2-s2.0-34547237649, eLIBRARY: 30933010,
  829. No English citation is currently avaliable for this publication.
    В.Г. Кановей. Первый Всесоюзный семинар по нестандартному анализу. Успехи математических наук, 1989, том 44, вып. 3(267), стр. 201, Mi: umn2600,
  830. 1988

    Articles

  831. V.G. Kanovei. The correctness of Euler's method for the factorization of the sine function into an infinite product. Russian Mathematical Surveys, 1988, Vol. 43, No. 4, P. 65–94, DOI: 10.1070/RM1988v043n04ABEH001868, eLIBRARY: 30811497,
  832. V.G. Kanovei. Kolmogorov's ideas in the theory of operations on sets. Russian Mathematical Surveys, 1988, Vol. 43, No. 6, P. 111–155, DOI: 10.1070/RM1988v043n06ABEH001995, eLIBRARY: 31124056,
  833. V.N. Grishin, V.G. Kanovei. Work on descriptive set theory carried out at the V. A. Steklov Institute of Mathematics. Proceedings of the Steklov Institute of Mathematics, 1990, Vol. 182, P. 245–265, Mi: tm1926
  834. 1987

    Books

  835. No English citation is currently avaliable for this publication.
    В.А. Любецкий. Основные понятия школьной математики. М.: Просвещение, 1987, 600 стр., Допущено Министерством образования в качестве учебного пособия, ISBN: 103-03-87, i
  836. Articles

  837. V.G. Kanovei. N. N. Luzin's problems on the existence of CA-sets without perfect subsets. Mathematical Notes, May-Jun 1987, Vol. 41, No. 5, P. 422–426, DOI: 10.1007/BF01159870, eLIBRARY: 31113310,
  838. 1986

    Articles

  839. No English citation is currently avaliable for this publication.
    В.А. Любецкий. Некоторые применения теории топосов к изучению алгебраических систем. в книге П.T. Джонстон «Теория топосов», дополнение к книге, М.: Наука, 1986, стр. 376–433
  840. 1985

    Articles

  841. No English citation is currently avaliable for this publication.
    В.А. Любецкий. О некоторых алгебраических проблемах нестандартного анализа. Доклады Академии наук СССР, 1985, том 280, № 1
  842. V.G. Kanovei. Problem of the existence of nonBorel AF||-sets. Mathematical Notes, 1985, Vol. 37, No. 2, P. 156–161, DOI: 10.1007/BF01156763, eLIBRARY: 30832215,
  843. V.G. Kanovei. The axiom of determinacy and the modern development of descriptive set theory. Journal of Mathematical Sciences, 1988, Vol. 40, No. 3, P. 257–287, DOI: 10.1007/BF01092890,
  844. V.G. Kanovei. The development of the descriptive theory of sets under the influence of the work of Luzin. Russian Mathematical Surveys, 1985, Vol. 40, 3, P. 135–180, DOI: 10.1070/RM1985v040n03ABEH003591, eLIBRARY: 31101833,
  845. 1984

    Books

  846. No English citation is currently avaliable for this publication.
    В.Г. Кановей. Аксиома выбора и аксиома детерминированности. серия «Проблемы науки и технического прогресса», М.: Наука, 1984, 63 cтр.
  847. V.G. Kanovei. Undecidable and decidable properties of constituents. Mathematics of the USSR-Sbornik, 1985, Vol. 52, No. 2, P. 491–519, DOI: 10.1070/SM1985v052n02ABEH002902,
  848. 1983

    Articles

  849. V.A. Lyubetsky, E.I. Gordon. Boolean extensions of uniform structures. In: Studies in Nonclassical Logics and Formal Systems, 1983, P. 82–153, in Russian
  850. No English citation is currently avaliable for this publication.
    В.А. Любецкий, Е.И. Гордон. Вложение пучков в гейтинговозначный универсум. Доклады Академии наук СССР, 1983, том 268, № 4, стр. 794–798
  851. V.G. Kanovei. Generalization of P.S. Novikov's theorem on cross sections of Borel sets. Mathematical Notes, 1983, Vol. 33, No. 2, P. 144–146, DOI: 10.1007/BF01160381, eLIBRARY: 30864984,
  852. V.G. Kanovei. An answer to Luzin's question about the separability of Ca-curves. Mathematical Notes, 1983, Vol. 33, No. 3, P. 223–224, DOI: 10.1007/BF01686331, eLIBRARY: 30989994,
  853. V.G. Kanovei. Structure of constituents of π11-sets. Siberian Mathematical Journal, 1983, Vol. 24, No. 2, P. 198–215, DOI: 10.1007/BF00968736,
  854. 1982

    Articles

  855. V.G. Kanovei. N. N. Luzin's problems on imbeddability and decomposability of projective sets. Mathematical Notes, 1982, Vol. 32, No. 1, P. 490–499, DOI: 10.1007/BF01137222, eLIBRARY: 30868299,
  856. 1981

    Articles

  857. No English citation is currently avaliable for this publication.
    В.А. Любецкий, др. Об одной модели взаимодействия тундровой растительности с абиотическим окружением. в книге Проблемы экологического мониторинга и моделирования экосистем, Гидрометеорология, 1981, том 4
  858. E.I. Gordon, V.A. Lyubetskij. Some applications of nonstandard analysis in the theory of Boolean-valued measures. Sov. Math., Dokl., 1981, Vol. 23, P. 142–146
  859. V.G. Kanovei. Theory of Zermelo without power set axiom and the theory of Zermelo-Frenkel without power set axiom are relatively consistent. Mathematical Notes, 1981, Vol. 30, No. 3, P. 695–702, DOI: 10.1007/BF01141627, eLIBRARY: 30916105,
  860. 1979

    Articles

  861. V.G. Kanovei. A consequence of the Martin axiom. Mathematical Notes, 1979, Vol. 26, No. 1, P. 549–553, DOI: 10.1007/BF01140280, eLIBRARY: 30845336,
  862. V.G. Kanovei. The set of all analytically definable sets of natural numbers can be defined analytically. Mathematics of the USSR-Izvestiya, 1980, Vol. 15, No. 3, P. 469–500, DOI: 10.1070/IM1980v015n03ABEH001258,
  863. 1978

    Articles

  864. V.G. Kanovei. Proof of a theorem of Lusin. Mathematical Notes, 1978, Vol. 23, No. 1, P. 35–37, DOI: 10.1007/BF01104883, eLIBRARY: 30914597,
  865. V.G. Kanovei. On the nonemptiness of classes in axiomatic set theory. Mathematics of the USSR-Izvestiya, 1978, Vol. 12, No. 3, P. 507–535, DOI: 10.1070/IM1978v012n03ABEH001997,
  866. 1976

    Books

  867. No English citation is currently avaliable for this publication.
    В.А. Любецкий. Дискретная математика. М.: МО, 1976, 175 стр., Допущено в качестве учебного пособия, ISBN: G-917017-89
  868. Articles

  869. V.A. Lyubetsky. Random sequences of numbers and A2 ssets. Studies in Set Theory and Nonclassical Logics, 1976, P. 96–122, in Russian
  870. 1975

    Articles

  871. V.G. Kanovei. On initial segments of degrees of constructibility. Mathematical Notes, 1975, Vol. 17, No. 6, P. 563–567, DOI: 10.1007/BF01442704, eLIBRARY: 30980640,
  872. V.G. Kanovei. The independence of some propositions of descriptive set theory and second order arithmetic. Soviet Mathematics, 1975, Vol. 16, No. 4, P. 937
  873. 1973

    Articles

  874. V.G. Kanovei. Singular cardinals. Mathematical Notes, 1973, Vol. 13, No. 5, P. 429–433, DOI: 10.1007/BF01147473, eLIBRARY: 30993090,
  875. 1971

    Articles

  876. V.A. Lyubetsky. Independence of certain propositions of descriptive set theory from the Zermelo–Fraenkel set theory. Vestnik Moskovskogo Universiteta. Ser. 1 Matematika Mekhanika, 1971, No. 2, P. 78–82
  877. No English citation is currently avaliable for this publication.
    В.А. Любецкий. Определимые последовательности ординалов. Доклады Академии наук СССР, 1971, том 196, № 6
  878. 1970

    Articles

  879. V.A. Lyubetsky. From the existence of a nonmeasurable set of type A2 there follows the existence of an uncountable set which contains no perfect subset of type CA. Dokl. Akad. Nauk SSSR, 1970, Vol. 195, No. 3, P. 548–550, in Russian
  880. 1969

    Articles

  881. No English citation is currently avaliable for this publication.
    В.А. Любецкий. Конструкция эффективно недостижимого кардинала в некотором естественном расширении теории множеств Цермело-Френкеля. Доклады Академии наук СССР, 1969, том 187, № 6
  882. 1968

    Articles

  883. V.A. Lyubetsky. Some corollaries of the hypothesis of noncountability of the set of constructible real numbers. Dokl. Akad. Nauk SSSR, 1968, Vol. 182, No. 4, P. 758–759, in Russian, Mi: dan34159

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